RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 GAB1Q13480 694 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 FAM174BQ3ZCQ3 159 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 PDCD4Q53EL6 469 aaKnown RBP13.4□□□□□ -0.26
CDPF1-203ENST00000404583 RNFT1Q5M7Z0 435 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 ANKRD46Q86W74 232 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 ATCAYQ86WG3 371 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 GALNT11Q8NCW6 608 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 PSMA8Q8TAA3 256 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 DIO2Q92813 273 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 C16orf58Q96GQ5 468 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 YIPF4Q9BSR8 244 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 CCDC28BQ9BUN5 200 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 TSPAN10Q9H1Z9 355 aaPredicted RBP13.4□□□□□ -0.26
CDPF1-203ENST00000404583 PROK2Q9HC23 129 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 NPHS2Q9NP85 383 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 ZCCHC3Q9NUD5 404 aaKnown RBP13.4□□□□□ -0.26
CDPF1-203ENST00000404583 CNOT11Q9UKZ1 510 aaKnown RBP13.4□□□□□ -0.26
CDPF1-203ENST00000404583 OR10H1Q9Y4A9 318 aa13.4□□□□□ -0.26
CDPF1-203ENST00000404583 UBR5O95071 2799 aaPredicted RBP13.4□□□□□ -0.26
CDPF1-203ENST00000404583 PRSS51A0A1B0GVH4 220 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 TP53I11O14683 189 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 UGT2B11O75310 529 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 SLC22A3O75751 556 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 CBX6O95503 412 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 FREM3P0C091 2139 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 NAGAP17050 411 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 GNLYP22749 145 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 GABRA3P34903 492 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 UQCRFS1P47985 274 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 TDGF1P3P51864 188 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 PRR5P85299 388 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 MRPL49Q13405 166 aaKnown RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ZNHIT3Q15649 155 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 DPY19L1Q2PZI1 675 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ANXA8L1Q5VT79 327 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 BICRALQ6AI39 1079 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 NUP54Q7Z3B4 507 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 FBXW8Q8N3Y1 598 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ZFP62Q8NB50 900 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 OR5AK3PQ8NH89 298 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 FBXO30Q8TB52 745 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 SPPL2AQ8TCT8 520 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 HGDQ93099 445 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 MS4A4EQ96PG1 132 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ADOQ96SZ5 270 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ZBTB18Q99592 522 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 FAM173AQ9BQD7 235 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 LMF2Q9BU23 707 aaKnown RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 NEUROD4Q9HD90 331 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 SDR39U1Q9NRG7 319 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 CNIH4Q9P003 139 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 DCTN4Q9UJW0 460 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 DOPEY2Q9Y3R5 2298 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 GTF3C1Q12789 2109 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 GXYLT2A0PJZ3 443 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 NPIPA5E9PKD4 350 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 TSPAN2O60636 221 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 PGRP06401 933 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 VIMP08670 466 aaKnown RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ACP2P11117 423 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 EDN3P14138 238 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 SOAT1P35610 550 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 MDH1P40925 334 aaKnown RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 MAP3K8P41279 467 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 KCNJ2P63252 427 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 PLGLB1Q02325 96 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 TP53BP2Q13625 1128 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 SPDYE7PQ495Y7 208 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 MFSD12Q6NUT3 480 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 PAOXQ6QHF9 649 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 CLEC4FQ8N1N0 589 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 MIER2Q8N344 545 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 CDRT4Q8N9R6 151 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 GLB1L3Q8NCI6 653 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 SLC16A11Q8NCK7 471 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ST6GALNAC3Q8NDV1 305 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 VPS37AQ8NEZ2 397 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 OR4A15Q8NGL6 344 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 OR9I1Q8NGQ6 314 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 PIK3R3Q92569 461 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 SLC9A6Q92581 669 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 HOXB13Q92826 284 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 EFHD2Q96C19 240 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 OTUB1Q96FW1 271 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 COL21A1Q96P44 957 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 NODALQ96S42 347 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 Q9N2J8 555 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 FGFR1OP2Q9NVK5 253 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ZIM2Q9NZV7 527 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 CBLCQ9ULV8 474 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 PCDHGB4Q9UN71 923 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 NPIPA1Q9UND3 350 aa13.39□□□□□ -0.27
CDPF1-203ENST00000404583 ZNF407Q9C0G0 2248 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms