RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZNF773Q6PK81 442 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PDSS2Q86YH6 399 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 GID4Q8IVV7 300 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 C7orf50Q9BRJ6 194 aaKnown RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 GCM1Q9NP62 436 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PCDHGA2Q9Y5H1 932 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 LCKP06239 509 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 YES1P07947 543 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 GPR143P51810 404 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 LUMP51884 338 aaPredicted RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 KCNAB2Q13303 367 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 SLC41A3Q96GZ6 507 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 RDH14Q9HBH5 336 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PCTPQ9UKL6 214 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 TRBV11-1A0A0K0K1C0 115 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 C1orf226A1L170 272 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 RGS9O75916 674 aaPredicted RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 ERCC1P07992 297 aaPredicted RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 ZNF404Q494X3 552 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 ERMP1Q7Z2K6 904 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 Q8N402 240 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 CTRCQ99895 268 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PTTG2Q9NZH5 202 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PCDH17O14917 1159 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 SCAMP2O15127 329 aaKnown RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 SYT7O43581 403 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 ENSAO43768 121 aaKnown RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 SOCS5O75159 536 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 RAB4AP20338 218 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PSMB5P28074 263 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 LILRB2Q8N423 598 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 NATD1Q8N6N6 113 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 SLC9B1P1A6NJY1 282 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 B8ZZF3 427 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 DLGAP1O14490 977 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 CASC3O15234 703 aaKnown RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 C8BP07358 591 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 SSX2Q16385 188 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 BATF2Q8N1L9 274 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 KCNN1Q92952 543 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 ZNF845Q96IR2 970 aaPredicted RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 CNN2Q99439 309 aaKnown RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 ELF4Q99607 663 aaPredicted RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 DPCDQ9BVM2 203 aaPredicted RBP13.06□□□□□ -0.32
VAPA-202ENST00000400000 SLC6A17Q9H1V8 727 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PCDHB16Q9NRJ7 776 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 POLR1CO15160 346 aaPredicted RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 PIGRP01833 764 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 CHRM4P08173 479 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ZNF14P17017 642 aaPredicted RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 TAS2R38P59533 333 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 BDH1Q02338 343 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ELAVL3Q14576 367 aaKnown RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 BATFQ16520 125 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 NTRK2Q16620 822 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 GRPEL2Q8TAA5 225 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 NAALAD2Q9Y3Q0 740 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 MYH3P11055 1940 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 HMGB3O15347 200 aaKnown RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 CPOXP36551 454 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ZDHHC14Q8IZN3 488 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 NPWQ8N729 165 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ADAMTS19Q8TE59 1207 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 SAMD11Q96NU1 681 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ZNF160Q9HCG1 818 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 SLIT2O94813 1529 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 EFCAB7A8K855 629 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 CAPNS1P04632 268 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 PTPRRQ15256 657 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 FBXO46Q6PJ61 603 aaPredicted RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 IMP4Q96G21 291 aaKnown RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 KATNBL1Q9H079 304 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ANKMY1Q9P2S6 941 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 H3BNC9 293 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 KIAA0513O60268 411 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 DIRAS3O95661 229 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 S1PR4O95977 384 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 SPINT3P49223 89 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 CSNK2A1P68400 391 aaPredicted RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 ZP2Q05996 745 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 PIP5KL1Q5T9C9 394 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 KIAA1211LQ6NV74 962 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 PLEKHG7Q6ZR37 379 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 CSNK2A3Q8NEV1 391 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 TMEM19Q96HH6 336 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ZNF355PQ9NSJ1 428 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 SERTAD4Q9NUC0 356 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 CARD8Q9Y2G2 431 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 AGPAT2O15120 278 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 AP1G1O43747 822 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ONECUT3O60422 494 aaPredicted RBP13.05□□□□□ -0.32
VAPA-202ENST00000400000 SSTR4P31391 388 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 RABIFP47224 123 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 ARSFP54793 590 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 TAS2R43P59537 309 aa13.05□□□□□ -0.32
VAPA-202ENST00000400000 MRPL21Q7Z2W9 205 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms