RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PAOXQ6QHF9 649 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 DGAT2L6Q6ZPD8 337 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 IKBIPQ70UQ0 350 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 OR4N5Q8IXE1 308 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 ZNF595Q8IYB9 648 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 ZCCHC7Q8N3Z6 543 aaKnown RBP9.53□□□□□ -0.88
NEDD8-202ENST00000396828 OR2M7Q8NG81 312 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 TSPEARQ8WU66 669 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 ASB15Q8WXK1 588 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 TSSK3Q96PN8 268 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 SERINC2Q96SA4 455 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 PRPF18Q99633 342 aaKnown RBP9.53□□□□□ -0.88
NEDD8-202ENST00000396828 SORBS1Q9BX66 1292 aaKnown RBP9.53□□□□□ -0.88
NEDD8-202ENST00000396828 TTTY12Q9BZ98 90 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 TP63Q9H3D4 680 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-202ENST00000396828 ZDHHC11Q9H8X9 412 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 MYNNQ9NPC7 610 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 ADAP2Q9NPF8 381 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 TIMMDC1Q9NPL8 285 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 ARL8BQ9NVJ2 186 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 HPF1Q9NWY4 346 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 COQ3Q9NZJ6 369 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 BAIAP2L1Q9UHR4 511 aa9.53□□□□□ -0.88
NEDD8-202ENST00000396828 LOC100653049A0A140TA62 436 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 CCDC154A6NI56 674 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 WASHC1A8K0Z3 465 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 BBIP1A8MTZ0 92 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 C17orf105B2RV13 164 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 NR5A2O00482 541 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 CLDN4O14493 209 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 ANKRD28O15084 1053 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 ANGPT2O15123 496 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 CTNSO60931 367 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 KRT34O76011 436 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 GBAP04062 536 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 IL6P05231 212 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 CCL3P10147 92 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 HIST1H1TP22492 207 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 ATP5A1P25705 553 aaKnown RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 MSX1P28360 303 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 RIPPLY3P57055 190 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 C21orf58P58505 322 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 RNF4P78317 190 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 MXRA7P84157 204 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 C2orf80Q0P641 193 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 FOXO1Q12778 655 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 BNIP1Q12981 228 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 SLAMF1Q13291 335 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 SNTB1Q13884 538 aaKnown RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 RCAN2Q14206 197 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 HEPACAMQ14CZ8 416 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 DPY19L1Q2PZI1 675 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 BLOC1S3Q6QNY0 202 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 HSDL2Q6YN16 418 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 SPNS3Q6ZMD2 512 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 GK5Q6ZS86 529 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 R3HCC1LQ7Z5L2 792 aaKnown RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 SNX32Q86XE0 403 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 TREML1Q86YW5 311 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 LIX1LQ8IVB5 337 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 TMEM251Q8N6I4 163 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 ACOT4Q8N9L9 421 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 OR9I1Q8NGQ6 314 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 CLHC1Q8NHS4 586 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 SLC2A12Q8TD20 617 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 C16orf78Q8WTQ4 265 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 ANKRD9Q96BM1 317 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 PPWD1Q96BP3 646 aaKnown RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 CNPPD1Q9BV87 410 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 FAIM2Q9BWQ8 316 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 ZNF717Q9BY31 904 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 OR8D2Q9GZM6 311 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 LYARQ9NX58 379 aaKnown RBP9.52□□□□□ -0.89
NEDD8-202ENST00000396828 NDUFAF1Q9Y375 327 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 FAM215AQ9Y5M1 114 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 CLCA3PQ9Y6N3 262 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 SPACA6W5XKT8 324 aa9.52□□□□□ -0.89
NEDD8-202ENST00000396828 AKAP6Q13023 2319 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 A0A0A6YYD5 115 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 CFLARO15519 480 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 AKAP10O43572 662 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 EEDO75530 441 aaKnown RBP9.51□□□□□ -0.89
NEDD8-202ENST00000396828 PRKRAO75569 313 aaKnown RBP9.51□□□□□ -0.89
NEDD8-202ENST00000396828 SCELO95171 688 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 LRATO95237 230 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 FAM58BPP0C7Q3 252 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 GLI4P10075 376 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 COX7A2P14406 83 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 CAPN3P20807 821 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 TACR1P25103 407 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 CHRNB4P30926 498 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 S100A3P33764 101 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 PIGAP37287 484 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 ADH7P40394 386 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 DLX5P56178 289 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 PLGLB1Q02325 96 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 STX4Q12846 297 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 ZNF585AQ6P3V2 769 aa9.51□□□□□ -0.89
NEDD8-202ENST00000396828 TRILQ7L0X0 811 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms