RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 MFSD12Q6NUT3 480 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 DND1Q8IYX4 353 aaKnown RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 MIER2Q8N344 545 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 FAM98AQ8NCA5 519 aaKnown RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 OR2M7Q8NG81 312 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 PIK3R3Q92569 461 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 SLC9A6Q92581 669 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 EFHD2Q96C19 240 aaPredicted RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 LMF2Q9BU23 707 aaKnown RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 AGPAT4Q9NRZ5 378 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 ZIM2Q9NZV7 527 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 CNOT11Q9UKZ1 510 aaKnown RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 PRSS51A0A1B0GVH4 220 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 GXYLT2A0PJZ3 443 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 CAPN14A8MX76 684 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 KLRC4-KLRK1H3BQV0 150 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 J3QKU1 62 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 REM1O75628 298 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 HMGN2P05204 90 aaKnown RBP18.3■□□□□ 0.52
SNCA-203ENST00000394986 PGRP06401 933 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 CNR1P21554 472 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 GABRA3P34903 492 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 UQCRFS1P47985 274 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 PRR5P85299 388 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 GAB1Q13480 694 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 LASP1Q14847 261 aaKnown RBP18.3■□□□□ 0.52
SNCA-203ENST00000394986 ZNHIT3Q15649 155 aaPredicted RBP18.3■□□□□ 0.52
SNCA-203ENST00000394986 ANXA8L1Q5VT79 327 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 ZNF324BQ6AW86 544 aaPredicted RBP18.3■□□□□ 0.52
SNCA-203ENST00000394986 FBXW8Q8N3Y1 598 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 SPPL2AQ8TCT8 520 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 NR4A3Q92570 626 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 JADE3Q92613 823 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 DIO2Q92813 273 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 HGDQ93099 445 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 NODALQ96S42 347 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 ADOQ96SZ5 270 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 PROK2Q9HC23 129 aa18.3■□□□□ 0.52
SNCA-203ENST00000394986 FAM120CQ9NX05 1096 aaKnown RBP18.3■□□□□ 0.52
SNCA-203ENST00000394986 TP53I11O14683 189 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 MAP3K8P41279 467 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 RFX3P48380 749 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 TDGF1P3P51864 188 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 GYS2P54840 703 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 STX1BP61266 288 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 CDRT4Q8N9R6 151 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 GLB1L3Q8NCI6 653 aaPredicted RBP18.29■□□□□ 0.52
SNCA-203ENST00000394986 SLC16A11Q8NCK7 471 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 SFXN5Q8TD22 340 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 HOXB13Q92826 284 aaPredicted RBP18.29■□□□□ 0.52
SNCA-203ENST00000394986 RILPQ96NA2 401 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 OR52E6Q96RD3 313 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 SLX1AQ9BQ83 275 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 TMEM120AQ9BXJ8 343 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 Q9N2J8 555 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 GPATCH2Q9NW75 528 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 CBLCQ9ULV8 474 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 NBASA2RRP1 2371 aa18.29■□□□□ 0.52
SNCA-203ENST00000394986 RNF103-CHMP3A0A140T963 221 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 TSPAN2O60636 221 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 CRYABP02511 175 aaKnown RBP18.28■□□□□ 0.52
SNCA-203ENST00000394986 C1QCP02747 245 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 TROVE2P10155 538 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNCA-203ENST00000394986 ZNF24P17028 368 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 NAGAP17050 411 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 IL12BP29460 328 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 CDKN2CP42773 168 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 RPS26P62854 115 aaKnown RBP18.28■□□□□ 0.52
SNCA-203ENST00000394986 KCNJ2P63252 427 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 ALDH6A1Q02252 535 aaKnown RBP18.28■□□□□ 0.52
SNCA-203ENST00000394986 MRPL49Q13405 166 aaKnown RBP18.28■□□□□ 0.52
SNCA-203ENST00000394986 DUSP5Q16690 384 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 TIGD2Q4W5G0 525 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 GALNT10Q86SR1 603 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 ZFP62Q8NB50 900 aaPredicted RBP18.28■□□□□ 0.52
SNCA-203ENST00000394986 VPS37AQ8NEZ2 397 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 OR56A1Q8NGH5 318 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 DNAJB8Q8NHS0 232 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 GPR151Q8TDV0 419 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 VPS33AQ96AX1 596 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 CHMP6Q96FZ7 201 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 RMND5BQ96G75 393 aaPredicted RBP18.28■□□□□ 0.52
SNCA-203ENST00000394986 CCDC115Q96NT0 180 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 COL21A1Q96P44 957 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 FAM173AQ9BQD7 235 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 INPP5KQ9BT40 448 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 TUBA8Q9NY65 449 aaPredicted RBP18.28■□□□□ 0.52
SNCA-203ENST00000394986 PCDHGB4Q9UN71 923 aa18.28■□□□□ 0.52
SNCA-203ENST00000394986 SHANK1Q9Y566 2161 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 FAM166BA8MTA8 275 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 NKX2-2O95096 273 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 CD1EP15812 388 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 NCF2P19878 526 aaPredicted RBP18.27■□□□□ 0.52
SNCA-203ENST00000394986 GNLYP22749 145 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 KRT20P35900 424 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 POLR2JP52435 117 aaKnown RBP18.27■□□□□ 0.52
SNCA-203ENST00000394986 CASP9P55211 416 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 PLGLB1Q02325 96 aa18.27■□□□□ 0.52
SNCA-203ENST00000394986 EXOSC6Q5RKV6 272 aaKnown RBP18.27■□□□□ 0.52
SNCA-203ENST00000394986 DNAJC14Q6Y2X3 702 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms