RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 A0A087WV62 115 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRAMEF25A6NGN4 478 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CAPN14A8MX76 684 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 NPIPA2E9PIF3 369 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 NPIPA3F8WFD2 350 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 PLOD2O00469 737 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 SDHDO14521 159 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACOX3O15254 700 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 TSPAN2O60636 221 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 TBX19O60806 448 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ICOSLGO75144 302 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 COQ9O75208 318 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 C6orf47O95873 294 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 TPOP07202 933 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ALDOCP09972 364 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRPS2P11908 318 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ENDOUP21128 410 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 TCEA1P23193 301 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 GDF1P27539 372 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 EPHA3P29320 983 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 IL12BP29460 328 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 PTGS2P35354 604 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CASP3P42574 277 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 FRKP42685 505 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ASMTP46597 345 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 MASP1P48740 699 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 TMED10P49755 219 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 SLC18A1P54219 525 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 MANFP55145 182 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 DCAF7P61962 342 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ADORA2A-AS1P86434 159 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 OCRLQ01968 901 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 EMX2Q04743 252 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 GAB1Q13480 694 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 PGS1Q32NB8 556 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CPTPQ5TA50 214 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ANGPTL8Q6UXH0 198 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 LARP4Q71RC2 724 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 HDXQ7Z353 690 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 MAVSQ7Z434 540 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 DOLPP1Q86YN1 238 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 WDR75Q8IWA0 830 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 RIMKLAQ8IXN7 391 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 DND1Q8IYX4 353 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CLECL1Q8IZS7 167 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CLEC4FQ8N1N0 589 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM109AQ8N4B1 249 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 NUP43Q8NFH3 380 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR5M9Q8NGP3 310 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR5AK3PQ8NH89 298 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 RELTQ969Z4 430 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ERP27Q96DN0 273 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 FAM120BQ96EK7 910 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 GIMAP5Q96F15 307 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZBED6CLQ96FA7 236 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF597Q96LX8 424 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 COL21A1Q96P44 957 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 SH3GL2Q99962 352 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 OSBPL11Q9BXB4 747 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ANGPTL4Q9BY76 406 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CXorf36Q9H7Y0 433 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 MEAF6Q9HAF1 191 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 SIRT3Q9NTG7 399 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 THAP1Q9NVV9 213 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ARGLU1Q9NWB6 273 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 TAS2R9Q9NYW1 312 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 NOP53Q9NZM5 478 aaKnown RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 KLRF1Q9NZS2 232 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CNIH4Q9P003 139 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ATP6V1HQ9UI12 483 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 HAO1Q9UJM8 370 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 BOKQ9UMX3 212 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 MAPRE3Q9UPY8 281 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 ZNF835Q9Y2P0 537 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR10H1Q9Y4A9 318 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 SNX8Q9Y5X2 465 aa7.02□□□□□ -1.29
HMGB3P1-201ENST00000393368 CROCCQ5TZA2 2017 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 LRRK2Q5S007 2527 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 A0A1B0GUH1 482 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 A0A1W2PRB8 838 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 WIPF3A6NGB9 483 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 OR6C70A6NIJ9 312 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 B4DXG7 233 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ADAM10O14672 748 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 TO15178 435 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SCO2O43819 266 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 GMFGO60234 142 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 TRAPPC6AO75865 159 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 BCAS2O75934 225 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 IGKV1D-16P01601 117 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 C1QCP02747 245 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ACP2P11117 423 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 ESRRAP11474 423 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 CYP4B1P13584 511 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 LBPP18428 481 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 PRPS1L1P21108 318 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 GABRA3P34903 492 aa7.01□□□□□ -1.29
HMGB3P1-201ENST00000393368 SOAT1P35610 550 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms