RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CDX2Q99626 313 aaPredicted RBP7.61□□□□□ -1.19
CKAP2-203ENST00000378037 C1QTNF2Q9BXJ5 285 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 HDHD5Q9BXW7 423 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 HDAC8Q9BY41 377 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 MVB12BQ9H7P6 319 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 PDE7BQ9NP56 450 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 COMMD3Q9UBI1 195 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 SLC7A7Q9UM01 511 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 ATG2AQ2TAZ0 1938 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 H3BNH8 94 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 SLC1A7O00341 560 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 ANKRD28O15084 1053 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 PIP5K1CO60331 668 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 OR6A2O95222 327 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 CELP19835 753 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 UQCRC2P22695 453 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 NAA20P61599 178 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 ELOCQ15369 112 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 ANKDD1AQ495B1 522 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 CPZQ66K79 652 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 ABHD17CQ6PCB6 329 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 GALNT7Q86SF2 657 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 NRROSQ86YC3 692 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 PTOV1Q86YD1 416 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 OR52L1Q8NGH7 329 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 MS4A6EQ96DS6 147 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 NKIRAS2Q9NYR9 191 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 MMP17Q9ULZ9 603 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 FER1L5A0AVI2 2057 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 MGAQ8IWI9 3026 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 PTPRDP23468 1912 aa7.61□□□□□ -1.19
CKAP2-203ENST00000378037 TLR4O00206 839 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 KLK8O60259 260 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 PAPLNO95428 1278 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 PORP16435 677 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 PPIBP23284 216 aaKnown RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 GTF2E2P29084 291 aaKnown RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SOX2P48431 317 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 KHKP50053 298 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SELENOWP63302 87 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 NCF4Q15080 339 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 GAB4Q2WGN9 574 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 FAM214AQ32MH5 1076 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 METAP1DQ6UB28 335 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 P2RY8Q86VZ1 359 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 TP53I13Q8NBR0 393 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 OR7G2Q8NG99 324 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 MCFD2Q8NI22 146 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SP7Q8TDD2 431 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 MTERF3Q96E29 417 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 AMDHD1Q96NU7 426 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 OR7D2Q96RA2 312 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 PHF7Q9BWX1 381 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 BEX2Q9BXY8 128 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 BEX1Q9HBH7 125 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 NEUROD4Q9HD90 331 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 C14orf119Q9NWQ9 140 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 ANKRD61A6NGH8 418 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 C4orf51C9J302 202 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SOX1O00570 391 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 BCAT2O15382 392 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SLC25A12O75746 678 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 OR5F1O95221 314 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 ATE1O95260 518 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 CSTAP01040 98 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 CAPNS1P04632 268 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 F13BP05160 661 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 ALPLP05186 524 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 CALRP27797 417 aaKnown RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 IL12BP29460 328 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 CAPZA2P47755 286 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 GCGRP47871 477 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 NUP107P57740 925 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 DCDC1P59894 354 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 C1DQ13901 141 aaKnown RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 RUNX2Q13950 521 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 MPEG1Q2M385 716 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 CTU2Q2VPK5 515 aaKnown RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 CRTC2Q53ET0 693 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 ARMCX4Q5H9R4 360 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 PLBD1Q6P4A8 553 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 NKAIN4Q8IVV8 208 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SMRP1Q8NCR6 262 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 OR52E4Q8NGH9 312 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 OR5P2Q8WZ92 322 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 MR1Q95460 341 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 ISOC1Q96CN7 298 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SAMD8Q96LT4 415 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 ZNF300Q96RE9 604 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 PRRG3Q9BZD7 231 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 TBL1XR1Q9BZK7 514 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 PRO3102Q9H379 93 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 NDUFAF4Q9P032 175 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 TNFRSF10DQ9UBN6 386 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 IGLV3-16A0A075B6K0 115 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 EFCAB10A6NFE3 127 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 A8MV72 311 aaPredicted RBP7.6□□□□□ -1.19
CKAP2-203ENST00000378037 C17orf105B2RV13 164 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 AQP9O43315 295 aa7.6□□□□□ -1.19
CKAP2-203ENST00000378037 SLC2A10O95528 541 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms