RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 NSUN5P2Q63ZY6 315 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 ATG16L1Q676U5 607 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 C18orf63Q68DL7 685 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 TMEM64Q6YI46 380 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 PAGE2Q7Z2X7 111 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 C10orf107Q8IVU9 208 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 GBP7Q8N8V2 638 aaPredicted RBP11.99□□□□□ -0.49
CLCN6-205ENST00000376492 OR6Y1Q8NGX8 325 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 HSPBAP1Q96EW2 488 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 ZNF597Q96LX8 424 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 FAM111AQ96PZ2 611 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 REPIN1Q9BWE0 567 aaKnown RBP11.99□□□□□ -0.49
CLCN6-205ENST00000376492 MRPL1Q9BYD6 325 aaKnown RBP11.99□□□□□ -0.49
CLCN6-205ENST00000376492 PRDM14Q9GZV8 571 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 MID1IP1Q9NPA3 183 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 CNIH4Q9P003 139 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 VPS29Q9UBQ0 182 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 SLC12A4Q9UP95 1085 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 CAMK2AQ9UQM7 478 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 KIAA1549Q9HCM3 1950 aa11.99□□□□□ -0.49
CLCN6-205ENST00000376492 ARHGAP21Q5T5U3 1957 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 MBD3L4A6NDZ8 208 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-205ENST00000376492 MBD3L3A6NE82 208 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-205ENST00000376492 MBD3L5A6NJ08 208 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-205ENST00000376492 RRP9O43818 475 aaKnown RBP11.98□□□□□ -0.49
CLCN6-205ENST00000376492 CTSSP25774 331 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 HMOX2P30519 316 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 SOX18P35713 384 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 ERVK-8P63133 956 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 CSTF3Q12996 717 aaKnown RBP11.98□□□□□ -0.49
CLCN6-205ENST00000376492 PCLAFQ15004 111 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 CCNYL2Q5T2Q4 361 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 SHEQ5VZ18 495 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 FAM219BQ5XKK7 198 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 COMMD6Q7Z4G1 85 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 SLC15A4Q8N697 577 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 C9orf106Q8NAJ2 232 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 MBD3L2Q8NHZ7 208 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-205ENST00000376492 FBXL20Q96IG2 436 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 TRMOQ9BU70 441 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 GATA5Q9BWX5 397 aaPredicted RBP11.98□□□□□ -0.49
CLCN6-205ENST00000376492 WWTR1Q9GZV5 400 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 JKAMPQ9P055 326 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 SLC17A7Q9P2U7 560 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 ERVK-19Q9WJR5 959 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 TIMM22Q9Y584 194 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
CLCN6-205ENST00000376492 CD8B2A6NJW9 211 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 FAM171A2A8MVW0 826 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 SMAD7O15105 426 aaKnown RBP11.97□□□□□ -0.49
CLCN6-205ENST00000376492 GPR75O95800 540 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 AIFM1O95831 613 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 GBAP04062 536 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 CLPSP04118 112 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 NR2F6P10588 404 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 SERPINB3P29508 390 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 ALDH3A1P30838 453 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 LSP1P33241 339 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 CDK9P50750 372 aaKnown RBP11.97□□□□□ -0.49
CLCN6-205ENST00000376492 FOXA1P55317 472 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 FBXW4P57775 412 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 PLIN5Q00G26 463 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 GABPB1Q06547 395 aaPredicted RBP11.97□□□□□ -0.49
CLCN6-205ENST00000376492 FOXF2Q12947 444 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 EBPQ15125 230 aaKnown RBP11.97□□□□□ -0.49
CLCN6-205ENST00000376492 NTRK2Q16620 822 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 EIPR1Q53HC9 387 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 FNDC7Q5VTL7 733 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 VASNQ6EMK4 673 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 LUZP2Q86TE4 346 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 NUDCD3Q8IVD9 361 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 PM20D2Q8IYS1 436 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 DND1Q8IYX4 353 aaKnown RBP11.97□□□□□ -0.49
CLCN6-205ENST00000376492 ANKRD42Q8N9B4 389 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 LRRC8CQ8TDW0 803 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 DIO2Q92813 273 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 CHMP6Q96FZ7 201 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 WDYHV1Q96HA8 205 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 Q96MF0 132 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 RILPQ96NA2 401 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 GNRHR2Q96P88 292 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 KCNA7Q96RP8 456 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 HBEGFQ99075 208 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 SIKE1Q9BRV8 207 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 RBM24Q9BX46 236 aaKnown RBP11.97□□□□□ -0.49
CLCN6-205ENST00000376492 UGT2B28Q9BY64 529 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 ACPTQ9BZG2 426 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 UBQLN3Q9H347 655 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 MANSC1Q9H8J5 431 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 WDR41Q9HAD4 459 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 GALNT8Q9NY28 637 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 STAB1Q9NY15 2570 aa11.97□□□□□ -0.49
CLCN6-205ENST00000376492 MPDZO75970 2070 aa11.96□□□□□ -0.49
CLCN6-205ENST00000376492 SH3D21A4FU49 640 aa11.96□□□□□ -0.49
CLCN6-205ENST00000376492 GMNCA6NCL1 334 aa11.96□□□□□ -0.49
CLCN6-205ENST00000376492 TRIM64A6NGJ6 449 aa11.96□□□□□ -0.49
CLCN6-205ENST00000376492 TRIM64BA6NI03 449 aa11.96□□□□□ -0.49
CLCN6-205ENST00000376492 WASHC1A8K0Z3 465 aa11.96□□□□□ -0.49
CLCN6-205ENST00000376492 TMEM114B3SHH9 223 aa11.96□□□□□ -0.49
CLCN6-205ENST00000376492 PGRMC2O15173 223 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms