RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 DDX6P26196 483 aaKnown RBP eCLIP13.98□□□□□ -0.171e-8■■□□□ 13.7
UBQLN1-202ENST00000376395 ELAVL4P26378 380 aaKnown RBP13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 UQCRC1P31930 480 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 MC3RP41968 323 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 PGDP52209 483 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 METAP1P53582 386 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 PSMD4P55036 377 aaKnown RBP13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 SIM1P81133 766 aaPredicted RBP13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 DEFB134Q4QY38 66 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 CCNJQ5T5M9 372 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 ACSM5Q6NUN0 579 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 IKBIPQ70UQ0 350 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 WDR20Q8TBZ3 569 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 SIPA1Q96FS4 1042 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 HOXD1Q9GZZ0 328 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 DDX31Q9H8H2 851 aaKnown RBP13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 SLC35C2Q9NQQ7 365 aa13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 SPATA6Q9NWH7 488 aaPredicted RBP13.98□□□□□ -0.17
UBQLN1-202ENST00000376395 TRBV5-3A0A0A0MS03 114 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 TRBV5-4A0A0C4DH59 114 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ANKRD34BA5PLL1 514 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 DDCP20711 480 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ACADLP28330 430 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 GRPRP30550 384 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 CLDN2P57739 230 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 GPR19Q15760 415 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 TMEM44Q2T9K0 475 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 FIGNL1Q6PIW4 674 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 HTR3DQ70Z44 454 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 OR56A1Q8NGH5 318 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 AKAP1Q92667 903 aaKnown RBP eCLIP13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 CNOT2Q9NZN8 540 aaKnown RBP13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 A0A1B0GVT2 93 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 GKN3PP0CG01 181 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 SYN1P17600 705 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ACVR2AP27037 513 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 HYAL2Q12891 473 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 SEC23BQ15437 767 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ACBD7Q8N6N7 88 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 SPRYD4Q8WW59 207 aaPredicted RBP13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 RNF31Q96EP0 1072 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 NUDT15Q9NV35 164 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 PCDHGB1Q9Y5G3 927 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 COLEC10Q9Y6Z7 277 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 MYOFQ9NZM1 2061 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 SCG5P05408 212 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 BMP8BP34820 402 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ETV5P41161 510 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 XCR1P46094 333 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ETV1P50549 477 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 FGFBP1Q14512 234 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ZC3H14Q6PJT7 736 aaKnown RBP13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 XKRXQ6PP77 449 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 BMP8AQ7Z5Y6 402 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 GDPD1Q8N9F7 314 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 PROKR2Q8NFJ6 384 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 RBM18Q96H35 190 aaKnown RBP13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 ZNF354BQ96LW1 612 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 OPALINQ96PE5 141 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 DPH1Q9BZG8 443 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 RC3H2Q9HBD1 1191 aaKnown RBP13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 NANSQ9NR45 359 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 C1GALT1Q9NS00 363 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 SOHLH2Q9NX45 425 aa13.97□□□□□ -0.17
UBQLN1-202ENST00000376395 EDNRAP25101 427 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 ERP29P30040 261 aaKnown RBP13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 HOXC8P31273 242 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 HTR3AP46098 478 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 HSF2Q03933 536 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 AKIRIN2Q53H80 203 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 OAFQ86UD1 273 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 LACC1Q8IV20 430 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 PHC2Q8IXK0 858 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 TTLQ8NG68 377 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 GABARAPL1Q9H0R8 117 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 TAAR2Q9P1P5 351 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 HS3ST2Q9Y278 367 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 FKBP7Q9Y680 259 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 LCTP09848 1927 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 PARP14Q460N5 1801 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 SLCO2B1O94956 709 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 MNDAP41218 407 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 LIM2P55344 173 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 NTRK2Q16620 822 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 HLA-DQA1Q5Y7H0 255 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 SFRP4Q6FHJ7 346 aaPredicted RBP13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 TCTN3Q6NUS6 607 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 OR52E4Q8NGH9 312 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 OR9A2Q8NGT5 310 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 OR8K3Q8NH51 312 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 DPCDQ9BVM2 203 aaPredicted RBP13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 MYNNQ9NPC7 610 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 THSD1Q9NS62 852 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 GNG8Q9UK08 70 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 PPIEQ9UNP9 301 aaKnown RBP13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 POLR1DQ9Y2S0 133 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 RGPD3A6NKT7 1758 aaPredicted RBP13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.17
UBQLN1-202ENST00000376395 KLHL18O94889 574 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms