RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 ZNF805Q5CZA5 627 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 FRZBQ92765 325 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 MMABQ96EY8 250 aaPredicted RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 SLC41A3Q96GZ6 507 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 FAM83CQ9BQN1 747 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 GPRC5BQ9NZH0 403 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 VSTM2BA6NLU5 285 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZNF736B4DX44 427 aaPredicted RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 VEGFCP49767 419 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 DYRK1AQ13627 763 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 GRIN2CQ14957 1233 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 CACNG4Q9UBN1 327 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 RPS21P63220 83 aaKnown RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 PLAG1Q6DJT9 500 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZC3H14Q6PJT7 736 aaKnown RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 SORCS1Q8WY21 1168 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 TMEM98Q9Y2Y6 226 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 PRAMEF2O60811 474 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 CEACAM7Q14002 265 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ERN2Q76MJ5 926 aaKnown RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 C22orf15Q8WYQ4 148 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 TSPAN10Q9H1Z9 355 aaPredicted RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 SLC6A5Q9Y345 797 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZNF705FA8MVS1 300 aaPredicted RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZNF705DP0CH99 300 aaPredicted RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZNF705BP0CI00 300 aaPredicted RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 NPY5RQ15761 445 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.36□□□□□ -0.913e-14■□□□□ 8.8
SPEN-201ENST00000375759 SRA1Q9HD15 236 aaKnown RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 ARID1AO14497 2285 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 CASC3O15234 703 aaKnown RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.36□□□□□ -0.919e-7■■■■■ 31.3
SPEN-201ENST00000375759 MVB12BQ9H7P6 319 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 SLC2A4RGQ9NR83 387 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 RLIMQ9NVW2 624 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 RIMBP3CA6NJZ7 1639 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 RIMBP3BA6NNM3 1639 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 RIMBP3Q9UFD9 1639 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 AKAIN1P0CW23 69 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 GALEQ14376 348 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 BATFQ16520 125 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 WDR45BQ5MNZ6 344 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZNF619Q8N2I2 560 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 OR5W2Q8NH69 310 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 HUS1BQ8NHY5 278 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 MRGPRX2Q96LB1 330 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 B4GALT7Q9UBV7 327 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ANHXE9PGG2 379 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 TGM6O95932 706 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 PGCP20142 388 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 CNR2P34972 360 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ID2Q02363 134 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZNF33BQ06732 778 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 PRRT3Q5FWE3 981 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 UBE2UQ5VVX9 321 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 PLBD1Q6P4A8 553 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 ZFP41Q8N8Y5 198 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 RAB7BQ96AH8 199 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 MKRN2Q9H000 416 aaKnown RBP9.36□□□□□ -0.91
SPEN-201ENST00000375759 B3GALT1Q9Y5Z6 326 aa9.36□□□□□ -0.91
SPEN-201ENST00000375759 A0A0D9SEW6 157 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 USP2O75604 605 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 OR52E8Q6IFG1 317 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 RCBTB1Q8NDN9 531 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 TMEM185AQ8NFB2 350 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 ZNF689Q96CS4 500 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 TXN2Q99757 166 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 GON7Q9BXV9 100 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 WDR6Q9NNW5 1121 aaKnown RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 REV1Q9UBZ9 1251 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 ECH1Q13011 328 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 ZNF648Q5T619 568 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 SUMF2Q8NBJ7 301 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 ZNF419Q96HQ0 510 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 UBBP0CG47 229 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 UBCP0CG48 685 aaKnown RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 GGT2P36268 569 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 NR0B1P51843 470 aaKnown RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 ZNF136P52737 540 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 OR4D2P58180 307 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 CMTM8Q8IZV2 173 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 MFFQ9GZY8 342 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 PLSCR1O15162 318 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 DPH2Q9BQC3 489 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 THAP7Q9BT49 309 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 GFOD1Q9NXC2 390 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 RPS27AP62979 156 aaKnown RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 UBA52P62987 128 aaKnown RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 MEF2AQ02078 507 aaPredicted RBP9.35□□□□□ -0.91
SPEN-201ENST00000375759 RNF111Q6ZNA4 994 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 PGAP1Q75T13 922 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 IGFN1Q86VF2 1251 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 HOXD1Q9GZZ0 328 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 CPED1A4D0V7 1026 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 A8MU76 341 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 MELKQ14680 651 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 CATSPEREQ5SY80 951 aa9.35□□□□□ -0.91
SPEN-201ENST00000375759 ANKK1Q8NFD2 765 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms