RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CREB5Q02930 508 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 OTUD1Q5VV17 481 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SGPP2Q8IWX5 399 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ZFAND1Q8TCF1 268 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TMEM41AQ96HV5 264 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SLC29A1Q99808 456 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 C11orf49Q9H6J7 331 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 WRAP73Q9P2S5 460 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PRKCGP05129 697 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PSMB1P20618 241 aaKnown RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 CXCL17Q6UXB2 119 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 NDUFAF7Q7L592 441 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TFGQ92734 400 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 CAMK2AQ9UQM7 478 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 A8MXE2 369 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 HSBP1L1C9JCN9 74 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ARPC5O15511 151 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TPST2O60704 377 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 GJB1P08034 283 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PYCR1P32322 319 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 FAM182BQ5T319 152 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SLC22A25Q6T423 547 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TMEM200AQ86VY9 491 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 MYLIPQ8WY64 445 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PRAP1Q96NZ9 151 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF395Q9H8N7 513 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 NDUFB2O95178 105 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PDGFAP04085 211 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ITGA5P08648 1049 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 CRABP1P29762 137 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PUS10Q3MIT2 529 aaKnown RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ALG1LQ6GMV1 187 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 DHRS9Q9BPW9 319 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 C1QTNF2Q9BXJ5 285 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TAAR5O14804 337 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SSX5O60225 188 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 GM2AP17900 193 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 S100A7P31151 101 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 GRIK5Q16478 980 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ENPP6Q6UWR7 440 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TANKQ92844 425 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ATG5Q9H1Y0 275 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 A0A1W2PPL8 197 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 A8MX80 341 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 DDCP20711 480 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 RAG2P55895 527 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 GPR139Q6DWJ6 353 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 KCTD9Q7L273 389 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 C6orf120Q7Z4R8 191 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 HORMAD2Q8N7B1 307 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 POC1BQ8TC44 478 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 SCARB1Q8WTV0 552 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 ACOT11Q8WXI4 607 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 ISG20Q96AZ6 181 aaKnown RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 KLHL15Q96M94 604 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 FIZ1Q96SL8 496 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 TGFB1P01137 390 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 ARSBP15848 533 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 CSNK1DP48730 415 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF280AP59817 542 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 RPS13P62277 151 aaKnown RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF616Q08AN1 781 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 SLAMF1Q13291 335 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 CCNL2Q96S94 520 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 A0A1W2PQ09 198 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 FARS2O95363 451 aaKnown RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 OPN1SWP03999 348 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 GRIN2CQ14957 1233 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 GPR68Q15743 365 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 TBC1D25Q3MII6 688 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 AVPI1Q5T686 147 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 TSSK4Q6SA08 328 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 LYSMD2Q8IV50 215 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTCH1-204ENST00000375290 KCNA7Q96RP8 456 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 PSORS1C1Q9UIG5 152 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 NRXN3Q9Y4C0 1643 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 C2orf92A0A1B0GVN3 265 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 TP73O15350 636 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 SOX14O95416 240 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 MASP1P48740 699 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 ITPRIPL2Q3MIP1 535 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 SLC16A9Q7RTY1 509 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 THEM6Q8WUY1 208 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 SEC22CQ9BRL7 303 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 CDCA4Q9BXL8 241 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 POLE4Q9NR33 117 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 SEMA4GQ9NTN9 838 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 A6NIZ1 184 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 CSF3P09919 207 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 KCNQ1P51787 676 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 RAP1BP61224 184 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 RAP1AP62834 184 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 GRB7Q14451 532 aa9.68□□□□□ -0.86
PTCH1-204ENST00000375290 C22orf39Q6P5X5 142 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms