RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 SLITRK5O94991 958 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 CTSBP07858 339 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 PRKAR1BP31321 381 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 AQP6Q13520 282 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 DCTN2Q13561 401 aaKnown RBP16.72■□□□□ 0.27
CTSA-204ENST00000372484 SPCS2Q15005 226 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 INAVAQ3KP66 663 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 IQCHQ86VS3 1027 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 GKN2Q86XP6 184 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 STX19Q8N4C7 294 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 ARL14Q8N4G2 192 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 AVL9Q8NBF6 648 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 FCGR1BQ92637 280 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 YIPF6Q96EC8 236 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 PRR14Q9BWN1 585 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 MIR1-1HGQ9H1L0 117 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 MTHFD2LQ9H903 347 aaPredicted RBP16.72■□□□□ 0.27
CTSA-204ENST00000372484 ANKHQ9HCJ1 492 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 CLN6Q9NWW5 311 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 WDR45Q9Y484 360 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 A0A1W2PR77 199 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 SLC9B1P1A6NJY1 282 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 TLR4O00206 839 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 RDH16O75452 317 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 GABARAPO95166 117 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 ACP2P11117 423 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 MMP11P24347 488 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 AVPR1BP47901 424 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 FASLGP48023 281 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 ARHGAP11BQ3KRB8 267 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.72■□□□□ 0.27
CTSA-204ENST00000372484 FHL5Q5TD97 284 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 UBE2UQ5VVX9 321 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 ZER1Q7Z7L7 766 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 P2RY8Q86VZ1 359 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 MCATQ8IVS2 390 aaKnown RBP16.72■□□□□ 0.27
CTSA-204ENST00000372484 MORN4Q8NDC4 146 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 OR9A4Q8NGU2 314 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 CACYBPQ9HB71 228 aaKnown RBP16.72■□□□□ 0.27
CTSA-204ENST00000372484 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTSA-204ENST00000372484 CHST2Q9Y4C5 530 aa16.72■□□□□ 0.27
CTSA-204ENST00000372484 TMEM131Q92545 1883 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 SPTBP11277 2137 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 SH3D21A4FU49 640 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 STSP08842 583 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 TNNI3P19429 210 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 ST3GAL4Q11206 333 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 COX10Q12887 443 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 TBCEQ15813 527 aaPredicted RBP16.71■□□□□ 0.27
CTSA-204ENST00000372484 SLX4IPQ5VYV7 408 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 TYW3Q6IPR3 259 aaKnown RBP16.71■□□□□ 0.27
CTSA-204ENST00000372484 PEX5LQ8IYB4 626 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 GJD3Q8N144 294 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 CLIP4Q8N3C7 705 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 B3GNT7Q8NFL0 401 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 HLA-CQ95604 372 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 SLC38A4Q969I6 547 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 IL4I1Q96RQ9 567 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 BCL7BQ9BQE9 202 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 IFT52Q9Y366 437 aa16.71■□□□□ 0.27
CTSA-204ENST00000372484 USP34Q70CQ2 3546 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 A0A087WV62 115 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 CPSF4LA6NMK7 179 aaKnown RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 PLOD3O60568 738 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 CCNYL3P0C7X3 344 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 PPM1FP49593 454 aaPredicted RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 RAB38P57729 211 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 RACK1P63244 317 aaKnown RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 LSM11P83369 360 aaKnown RBP eCLIP16.7■□□□□ 0.263e-9■□□□□ 10.6
CTSA-204ENST00000372484 RPL6Q02878 288 aaKnown RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 NDUFA9Q16795 377 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 PUS10Q3MIT2 529 aaKnown RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 CCNJQ5T5M9 372 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 PTCRAQ6ISU1 281 aaPredicted RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 CASP12Q6UXS9 341 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 ABCA7Q8IZY2 2146 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 CADM4Q8NFZ8 388 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 TBC1D15Q8TC07 691 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 NR4A3Q92570 626 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 SDF2Q99470 211 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 PIGUQ9H490 435 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 FBXL21Q9UKT6 434 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 ZNF232Q9UNY5 417 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 ZNF443Q9Y2A4 671 aaPredicted RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 THADAQ6YHU6 1953 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 A0A1B0GVG6 124 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 CYP7B1O75881 506 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 IFNA8P32881 189 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 CAPZBP47756 277 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 ENTPD1P49961 510 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 RGS8P57771 180 aaPredicted RBP16.7■□□□□ 0.26
CTSA-204ENST00000372484 HOXC5Q00444 222 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 OCA2Q04671 838 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 PRICKLE4Q2TBC4 344 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 C1orf94Q6P1W5 598 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 CD300LDQ6UXZ3 194 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 SLC38A3Q99624 504 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 MAP3K3Q99759 626 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 ITPAQ9BY32 194 aa16.7■□□□□ 0.26
CTSA-204ENST00000372484 NDOR1Q9UHB4 597 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms