RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 SERTAD3Q9UJW9 196 aa16.34■□□□□ 0.21
SSBP3-203ENST00000371319 GMEB2Q9UKD1 530 aa16.34■□□□□ 0.21
SSBP3-203ENST00000371319 ACAD8Q9UKU7 415 aa16.34■□□□□ 0.21
SSBP3-203ENST00000371319 CHST2Q9Y4C5 530 aa16.34■□□□□ 0.21
SSBP3-203ENST00000371319 LAMA1P25391 3075 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 IGHV5-10-1A0A0J9YXX1 117 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 HRKO00198 91 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 SYT5O00445 386 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 PCDH17O14917 1159 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 SLC16A6O15403 523 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 NKX2-2O95096 273 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 GADD45GO95257 159 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 CKMT1AP12532 417 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 HPCAP84074 193 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 APOFQ13790 326 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 MICAQ29983 383 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF311Q5JNZ3 666 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 DEF8Q6ZN54 512 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 SLC5A8Q8N695 610 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 ATG16L2Q8NAA4 619 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 IFI44Q8TCB0 444 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 PIK3R3Q92569 461 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 RMND5BQ96G75 393 aaPredicted RBP16.33■□□□□ 0.2
SSBP3-203ENST00000371319 OR1F2PQ96R84 312 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 LMF2Q9BU23 707 aaKnown RBP16.33■□□□□ 0.2
SSBP3-203ENST00000371319 GTPBP2Q9BX10 602 aaKnown RBP16.33■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF350Q9GZX5 532 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 SMOC1Q9H4F8 434 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 FANCEQ9HB96 536 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 KIF17Q9P2E2 1029 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 MKLN1Q9UL63 735 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 SATB2Q9UPW6 733 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 MYRFQ9Y2G1 1151 aa16.33■□□□□ 0.2
SSBP3-203ENST00000371319 LOC100130705A0A1B0GUX0 176 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 E9PQ18 207 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 AVPR2P30518 371 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 GALNSP34059 522 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 EMDP50402 254 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF155Q12901 538 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-203ENST00000371319 DSG2Q14126 1118 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 NPTX1Q15818 432 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 DCST2Q5T1A1 773 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 CCNJQ5T5M9 372 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 OR6T1Q8NGN1 323 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 OR52P1PQ8NH57 321 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 RBM18Q96H35 190 aaKnown RBP16.32■□□□□ 0.2
SSBP3-203ENST00000371319 CCDC74BQ96LY2 380 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 SAP130Q9H0E3 1048 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 RIBC2Q9H4K1 309 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 MTHFD2LQ9H903 347 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-203ENST00000371319 FOLH1BQ9HBA9 442 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 KRT84Q9NSB2 600 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 RLIMQ9NVW2 624 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 A4GNTQ9UNA3 340 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 CDC14AQ9UNH5 594 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 SLC9A8Q9Y2E8 581 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 WDR45Q9Y484 360 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 MMACHCQ9Y4U1 282 aa16.32■□□□□ 0.2
SSBP3-203ENST00000371319 A0A1B0GX78 115 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 GXYLT2A0PJZ3 443 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 SEC24DO94855 1032 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 FBLP22087 321 aaKnown RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 RPS4Y1P22090 263 aaKnown RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 PRKAR1BP31321 381 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 SSTR4P31391 388 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 GABRA3P34903 492 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 CLK3P49761 638 aaKnown RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 SERTAD2Q14140 314 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 COLEC12Q5KU26 742 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF691Q5VV52 312 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 TTC33Q6PID6 262 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 TSPYL5Q86VY4 417 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 COX18Q8N8Q8 333 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 GPR151Q8TDV0 419 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 FEVQ99581 238 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 DPYSL5Q9BPU6 564 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 PELOQ9BRX2 385 aaKnown RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 FUZQ9BT04 418 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 YIPF2Q9BWQ6 316 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 MRPS26Q9BYN8 205 aaKnown RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 GRIP2Q9C0E4 1043 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 NMNAT1Q9HAN9 279 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF304Q9HCX3 659 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 FBXO34Q9NWN3 711 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF443Q9Y2A4 671 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 GPR55Q9Y2T6 319 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 HEMK1Q9Y5R4 338 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-203ENST00000371319 KMT2EQ8IZD2 1858 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 NINQ8N4C6 2090 aa16.31■□□□□ 0.2
SSBP3-203ENST00000371319 IGKV3D-11A0A0A0MRZ8 115 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 TRBV4-1A0A0J9YWV2 114 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ARRDC5A6NEK1 342 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 UGT2B11O75310 529 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CCNB2O95067 398 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 AK1P00568 194 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CLPSP04118 112 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ANXA8P13928 327 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 POU6F2P78424 691 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 IL1RL1Q01638 556 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms