RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OXA1LQ15070 435 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 SYT6Q5T7P8 510 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 SNX18Q96RF0 628 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF436Q9C0F3 470 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM168Q9H0V1 697 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 SRA1Q9HD15 236 aaKnown RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 POT1Q9NUX5 634 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 GLTPD2A6NH11 291 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 ARPC1BO15143 372 aaKnown RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 PPM1BO75688 479 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 GP1BBP13224 206 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 EIF2S3P41091 472 aaKnown RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 NRG3P56975 720 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 TEAD2Q15562 447 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 ARRDC2Q8TBH0 407 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 KLHL21Q9UJP4 597 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 BOLA1Q9Y3E2 137 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 NUP98P52948 1817 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 NAP1L6A6NFF2 107 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 RHPN2P1A8MT19 583 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 J3KTA2 159 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 ANKRD28O15084 1053 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 SLC16A6O15403 523 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 FKTNO75072 461 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 GIFP27352 417 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 RORAP35398 523 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 KCTD18Q6PI47 426 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 C3P1Q6ZMU1 363 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 OR4K13Q8NH42 304 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 SGTBQ96EQ0 304 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 YARS2Q9Y2Z4 477 aaKnown RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 KLK4Q9Y5K2 254 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 NWD2Q9ULI1 1742 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 A6NIN4 97 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 ATXN1LP0C7T5 689 aaKnown RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 SRCP12931 536 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 GXYLT1Q4G148 440 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 MEX3DQ86XN8 651 aaKnown RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 GTPBP8Q8N3Z3 284 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM184CQ9NVA4 438 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 OR6C2Q9NZP2 312 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 RGPD5Q99666 1765 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 BORCS7-ASMTA0A0B4J1R7 106 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 METTL15A6NJ78 407 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 GPR143P51810 404 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 CDK10Q15131 360 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 PCGF3Q3KNV8 242 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 SPIN3Q5JUX0 258 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 MLIPQ5VWP3 458 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 LACC1Q8IV20 430 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 CD99L2Q8TCZ2 262 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 AK6Q9Y3D8 172 aaKnown RBP15.09■□□□□ 0.01
COL17A1-202ENST00000369733 UBR2Q8IWV8 1755 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 B8ZZF3 427 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 GJB3O75712 270 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 GALTP07902 379 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 S100A12P80511 92 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 ENTHD1Q8IYW4 607 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 JSRP1Q96MG2 331 aaPredicted RBP15.09■□□□□ 0.01
COL17A1-202ENST00000369733 SAP130Q9H0E3 1048 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 MYNNQ9NPC7 610 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 ASF1BQ9NVP2 202 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 CRYBG1Q9Y4K1 1723 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 MROH6A6NGR9 719 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 F8W036 122 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 HMGB3O15347 200 aaKnown RBP15.09■□□□□ 0.01
COL17A1-202ENST00000369733 AHSA1O95433 338 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 CSTAP01040 98 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 CD3GP09693 182 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 BLOC1S1P78537 153 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 FAM69AQ5T7M9 428 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 MFSD8Q8NHS3 518 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 IRF7Q92985 503 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 GAL3ST3Q96A11 431 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 EIF5A2Q9GZV4 153 aaKnown RBP15.09■□□□□ 0.01
COL17A1-202ENST00000369733 SERINC1Q9NRX5 453 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 ADAMTS5Q9UNA0 930 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM14AQ9Y6G1 99 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 PRSS21Q9Y6M0 314 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 ANKRD33BA6NCL7 494 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 C11orf98E9PRG8 122 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 M0QZQ0 153 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 AMY2AP04746 511 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 CAV3P56539 151 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF91Q05481 1191 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 NOGQ13253 232 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM35AQ53FP2 167 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 ASPGQ86U10 573 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 HCAR2Q8TDS4 363 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 PCDHB16Q9NRJ7 776 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 RASD1Q9Y272 281 aa15.09■□□□□ 0.01
COL17A1-202ENST00000369733 SLC22A5O76082 557 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 MT-ND4P03905 459 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 ERVK-25P63136 954 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 RAB11BQ15907 218 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 RAB41Q5JT25 222 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 FAM205BPQ63HN1 556 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 FCRLBQ6BAA4 426 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 ANKRD12Q6UB98 2062 aa15.08■□□□□ 0.01
COL17A1-202ENST00000369733 MFSD6LQ8IWD5 586 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms