RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTSD-202ENST00000367196 DGKQP52824 942 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 NAGLUP54802 743 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 EEF1A1P68104 462 aaKnown RBP13.51□□□□□ -0.25
CTSD-202ENST00000367196 HMGCS1Q01581 520 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 LTB4RQ15722 352 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 TCHHL1Q5QJ38 904 aaPredicted RBP13.51□□□□□ -0.25
CTSD-202ENST00000367196 EEF1A1P5Q5VTE0 462 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 GALNT18Q6P9A2 607 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 YRDCQ86U90 279 aaKnown RBP13.51□□□□□ -0.25
CTSD-202ENST00000367196 PLCZ1Q86YW0 608 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 CCDC116Q8IYX3 515 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 TMBIM1Q969X1 311 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 EXOSC8Q96B26 276 aaKnown RBP13.51□□□□□ -0.25
CTSD-202ENST00000367196 SLC35A4Q96G79 324 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
CTSD-202ENST00000367196 SFXN3Q9BWM7 321 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 SERHLQ9NQF3 203 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 SLC35C2Q9NQQ7 365 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 TAS2R10Q9NYW0 307 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 HEY2Q9UBP5 337 aa13.51□□□□□ -0.25
CTSD-202ENST00000367196 FAM221AA4D161 298 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 RIPK2O43353 540 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 CHMP24386 653 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 TACR1P25103 407 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 PTGDSP41222 190 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 IST1P53990 364 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 WNT3P56703 355 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 DUSP2Q05923 314 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 ZNF763Q0D2J5 394 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 CEBPEQ15744 281 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 DCST1Q5T197 706 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 FAM180BQ6P0A1 224 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 OR9A2Q8NGT5 310 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 VSTM2LQ96N03 204 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 BBS4Q96RK4 519 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 MIEF1Q9NQG6 463 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 DCDC2Q9UHG0 476 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 ST6GALNAC2Q9UJ37 374 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 DKKL1Q9UK85 242 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 WBP11Q9Y2W2 641 aaKnown RBP13.5□□□□□ -0.25
CTSD-202ENST00000367196 OR10H1Q9Y4A9 318 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 AKAP6Q13023 2319 aa13.5□□□□□ -0.25
CTSD-202ENST00000367196 MTORP42345 2549 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 SERTM1A2A2V5 107 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 PLOD3O60568 738 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 GLRA3O75311 464 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 CRCPO75575 148 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 ANXA4P09525 319 aaPredicted RBP13.49□□□□□ -0.25
CTSD-202ENST00000367196 CT45A8P0DMV1 189 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 CT45A9P0DMV2 189 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 EPXP11678 715 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 DDCP20711 480 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 GCAP28676 217 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 NTSP30990 170 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 CPA2P48052 419 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 PNLIPRP2P54317 469 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 GAB1Q13480 694 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 DAZAP2Q15038 168 aaPredicted RBP13.49□□□□□ -0.25
CTSD-202ENST00000367196 IMPG1Q17R60 797 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 CT45A2Q5DJT8 189 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 SPDYAQ5MJ70 313 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 POMZP3Q6PJE2 187 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 LARP4Q71RC2 724 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTSD-202ENST00000367196 C16orf78Q8WTQ4 265 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 KAT2AQ92830 837 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 WNT2BQ93097 391 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 APIPQ96GX9 242 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 SFXN2Q96NB2 322 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 UCN2Q96RP3 112 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 ADOQ96SZ5 270 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 CXXC4Q9H2H0 198 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 FOLH1BQ9HBA9 442 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 SIRT5Q9NXA8 310 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 MRTO4Q9UKD2 239 aaKnown RBP13.49□□□□□ -0.25
CTSD-202ENST00000367196 GRID1Q9ULK0 1009 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 CBLCQ9ULV8 474 aa13.49□□□□□ -0.25
CTSD-202ENST00000367196 MRPS18CQ9Y3D5 142 aaKnown RBP13.49□□□□□ -0.25
CTSD-202ENST00000367196 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
CTSD-202ENST00000367196 TSPAN2O60636 221 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 MYL2P10916 166 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 CHN1P15882 459 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 SOX18P35713 384 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 HTR6P50406 440 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 PSMD4P55036 377 aaKnown RBP13.48□□□□□ -0.25
CTSD-202ENST00000367196 DIO3P55073 304 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 GFRA1P56159 465 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 PPP2R2AP63151 447 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 RAE1P78406 368 aaKnown RBP13.48□□□□□ -0.25
CTSD-202ENST00000367196 BTKQ06187 659 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
CTSD-202ENST00000367196 SNTB1Q13884 538 aaKnown RBP13.48□□□□□ -0.25
CTSD-202ENST00000367196 ZNHIT3Q15649 155 aaPredicted RBP13.48□□□□□ -0.25
CTSD-202ENST00000367196 CHMP1BQ7LBR1 199 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 CDC20BQ86Y33 519 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 CCNYL1Q8N7R7 359 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 WDSUB1Q8N9V3 476 aa13.48□□□□□ -0.25
CTSD-202ENST00000367196 C9orf106Q8NAJ2 232 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms