RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CDH3P22223 829 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 STT3AP46977 705 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 PDX1P52945 283 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 NUDT6P53370 316 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 SKP1P63208 163 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ST3GAL3Q11203 375 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 BNIP3Q12983 259 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 AQP6Q13520 282 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 SPCS2Q15005 226 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 LEXMQ3ZCV2 418 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 TMEM201Q5SNT2 666 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 FRRS1Q6ZNA5 592 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 VRK2Q86Y07 508 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 PEX5LQ8IYB4 626 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 C19orf47Q8N9M1 422 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 MORN4Q8NDC4 146 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF675Q8TD23 568 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 QRSL1Q9H0R6 528 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ANKHQ9HCJ1 492 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 C2orf42Q9NWW7 574 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 WDR45Q9Y484 360 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 AP3D1O14617 1153 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 LCKP06239 509 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ALOX5P09917 674 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 CCNYL3P0C7X3 344 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ACP2P11117 423 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 NME1P15531 152 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ST6GAL1P15907 406 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 TYRP1P17643 537 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 CD38P28907 300 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 FASLGP48023 281 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 SHC2P98077 582 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ST3GAL4Q11206 333 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 LARS2Q15031 903 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 EIPR1Q53HC9 387 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ENTPD8Q5MY95 495 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 EXOSC6Q5RKV6 272 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 NIPAL1Q6NVV3 410 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 PRSS41Q7RTY9 318 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF761Q86XN6 746 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 NLGN4XQ8N0W4 816 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 GNPDA2Q8TDQ7 276 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 PMM1Q92871 262 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 STACQ99469 402 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 AMBNQ9NP70 447 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 C11orf16Q9NQ32 467 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 GPR83Q9NYM4 423 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 SATB2Q9UPW6 733 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF443Q9Y2A4 671 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 CEP192Q8TEP8 1941 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 FGF17O60258 216 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 SRPX2O60687 465 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 CYP7B1O75881 506 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 UBXN7O94888 489 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 SOX30O94993 753 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 ZBTB11O95625 1053 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 AK1P00568 194 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 THBS1P07996 1170 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 STSP08842 583 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 NT5EP21589 574 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 MMP11P24347 488 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 ALDH4A1P30038 563 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 C21orf33P30042 268 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 ENTPD1P49961 510 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 RGS8P57771 180 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 PPP1CAP62136 330 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 GAS6Q14393 721 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 IRF3Q14653 427 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 DUSP5Q16690 384 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 PUS10Q3MIT2 529 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 LINC00299Q6ZSB3 139 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 HMGN2P46Q86SG4 172 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 FAM160A2Q8N612 972 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 CDRT4Q8N9R6 151 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 B3GNT7Q8NFL0 401 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 TOR1AIP2Q8NFQ8 470 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 CADM4Q8NFZ8 388 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 OR8J1Q8NGP2 316 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 CDCA4Q9BXL8 241 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 DUSP22Q9NRW4 184 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 TMEM74BQ9NUR3 256 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 CLCA2Q9UQC9 943 aa17.1■□□□□ 0.33
PDLIM7-203ENST00000359895 A0A1W2PR77 199 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 BLACEA4D250 179 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 LILRA5A6NI73 299 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 M0R3G1 203 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 FCMRO60667 390 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 LDB3O75112 727 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 CNOT3O75175 753 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 SOX14O95416 240 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 TP53P04637 393 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 CD36P16671 472 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 TGFBR2P37173 567 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 DUSP8Q13202 625 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF829Q3KNS6 432 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 TRMT12Q53H54 448 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 MEDAGQ5VYS4 303 aa17.09■□□□□ 0.33
PDLIM7-203ENST00000359895 TYW3Q6IPR3 259 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms