RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 XAGE5Q8WWM1 108 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 OR1E3Q8WZA6 343 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 TREX2Q9BQ50 279 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 APOBEC3BQ9UH17 382 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 FBXW2Q9UKT8 454 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 CFL2Q9Y281 166 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 KLHL20Q9Y2M5 609 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ATG4BQ9Y4P1 393 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 PCDHGA5Q9Y5G8 931 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 PNMA8CA0A1B0GUJ8 204 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 POM121BA6NF01 834 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 PATE3B3GLJ2 98 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 M0R129 80 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 PGRMC2O15173 223 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 ZW10O43264 779 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 SEMA7AO75326 666 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 CERS1P27544 350 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 SOX6P35712 828 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 ETV6P41212 452 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 TSFMP43897 325 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 CLDN2P57739 230 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 KRR1Q13601 381 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 NDUFA9Q16795 377 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 PLA2G2CQ5R387 149 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 TCEAL6Q6IPX3 200 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 ENPP7Q6UWV6 458 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 AMIGO1Q86WK6 493 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 TRIM69Q86WT6 500 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 RBM45Q8IUH3 476 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 TCEAL3Q969E4 200 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 MOAP1Q96BY2 351 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 MGLLQ99685 303 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 FUZQ9BT04 418 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 SPATA5L1Q9BVQ7 753 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 CDADC1Q9BWV3 514 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 PCED1AQ9H1Q7 454 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 ARMC7Q9H6L4 198 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 SYNPO2LQ9H987 977 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 SIAEQ9HAT2 523 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 DLL3Q9NYJ7 618 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 TBC1D29Q9UFV1 150 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 PILRBQ9UKJ0 227 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 ENTPD4Q9Y227 616 aa13.42□□□□□ -0.26
NIPAL3-203ENST00000358028 CCDC88CQ9P219 2028 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 CCRL2O00421 344 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 DSCR3O14972 297 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 EML2O95834 649 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 DBTP11182 482 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 NDUFS1P28331 727 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 CSTF2P33240 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 TGFBR1P36897 503 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 STXBP1P61764 594 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 DUSP2Q05923 314 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 COX10Q12887 443 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 GNA13Q14344 377 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 NFATC4Q14934 902 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 NCF4Q15080 339 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 SEC23BQ15437 767 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 GPR19Q15760 415 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 ZNF750Q32MQ0 723 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 TPRG1LQ5T0D9 272 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 PEAR1Q5VY43 1037 aaPredicted RBP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 C18orf63Q68DL7 685 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC48A1Q6P1K1 146 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 BHLHB9Q6PI77 547 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 CD300LDQ6UXZ3 194 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 GDPGP1Q6ZNW5 385 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 PAQR7Q86WK9 346 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 NLGN4XQ8N0W4 816 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 OR56A1Q8NGH5 318 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 SUN3Q8TAQ9 357 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 LCN9Q8WX39 176 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 KLHL6Q8WZ60 621 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 DNASE2BQ8WZ79 361 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 CNRIP1Q96F85 164 aaPredicted RBP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 ORAI3Q9BRQ5 295 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 MIR1-1HGQ9H1L0 117 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 BCL2L10Q9HD36 194 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 SEMA4GQ9NTN9 838 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 LYARQ9NX58 379 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 OR6C2Q9NZP2 312 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 CES1P1Q9UKY3 287 aa13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 MN1Q10571 1320 aaPredicted RBP13.41□□□□□ -0.26
NIPAL3-203ENST00000358028 LOC100506127A0A0U1RQW1 187 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 LRP3O75074 770 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 SNRNP200O75643 2136 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 SNX4O95219 450 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 ALPPL2P10696 532 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 F3P13726 295 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CSNK2A2P19784 350 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 AK4P27144 223 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 GRK5P34947 590 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 PTGER1P34995 402 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 CRISP3P54108 245 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 PRKAG1P54619 331 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 RAB8AP61006 207 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 TGM3Q08188 693 aa13.4□□□□□ -0.26
NIPAL3-203ENST00000358028 SF3A2Q15428 464 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms