RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SRSF5Q13243 272 aaKnown RBP9.17□□□□□ -0.94
GABPA-201ENST00000354828 ZNF423Q2M1K9 1284 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 KCTD18Q6PI47 426 aaPredicted RBP9.17□□□□□ -0.94
GABPA-201ENST00000354828 ERI1Q8IV48 349 aaKnown RBP9.17□□□□□ -0.94
GABPA-201ENST00000354828 KCNE4Q8WWG9 221 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 PMM1Q92871 262 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 PITX2Q99697 317 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 HMG20AQ9NP66 347 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 COMMD9Q9P000 198 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 MROH6A6NGR9 719 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 FOXE1O00358 373 aaPredicted RBP9.17□□□□□ -0.94
GABPA-201ENST00000354828 PROM1O43490 865 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 ALOX12BO75342 701 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 HMGN2P05204 90 aaKnown RBP9.17□□□□□ -0.94
GABPA-201ENST00000354828 HTR1AP08908 422 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 FUT4P22083 530 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 GABREP78334 506 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 NPRL3Q12980 569 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 GARNL3Q5VVW2 1013 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 METRNLQ641Q3 311 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 ADNP2Q6IQ32 1131 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 CLIP4Q8N3C7 705 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 CADM4Q8NFZ8 388 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 C11orf24Q96F05 449 aaPredicted RBP9.17□□□□□ -0.94
GABPA-201ENST00000354828 PGAM5Q96HS1 289 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 NODALQ96S42 347 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 MFRPQ9BY79 579 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 MRPS26Q9BYN8 205 aaKnown RBP9.17□□□□□ -0.94
GABPA-201ENST00000354828 PCED1AQ9H1Q7 454 aa9.17□□□□□ -0.94
GABPA-201ENST00000354828 H3BUI4 141 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 KDELR2P33947 212 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 PIP5KL1Q5T9C9 394 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 OR52N2Q8NGI0 321 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 OR1J4Q8NGS1 313 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 SPRYD4Q8WW59 207 aaPredicted RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 VN1R3Q9BXE9 311 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 COQ3Q9NZJ6 369 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 DAPK2Q9UIK4 370 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 SPEF1Q9Y4P9 236 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 RGPD3A6NKT7 1758 aaPredicted RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 RGPD4Q7Z3J3 1758 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 CCDC187A0A096LP49 1063 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 ANKRD28O15084 1053 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 TSC22D2O75157 780 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 CKMT2P17540 419 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 CYB561P49447 251 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 TRA2BP62995 288 aaKnown RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 SMAD2Q15796 467 aaKnown RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 AGBL4Q5VU57 503 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 WDR53Q7Z5U6 358 aaPredicted RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 PIGWQ7Z7B1 504 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 APLFQ8IW19 511 aaPredicted RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 OAZ3Q9UMX2 235 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 HTR3EA5X5Y0 456 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 EEF1E1-BLOC1S5C9J1V9 151 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 WRBO00258 174 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 EEF1E1O43324 174 aaKnown RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 PSIP1O75475 530 aaKnown RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 KCNK5O95279 499 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 SLC19A1P41440 591 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 ADARP55265 1226 aaKnown RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 CDKL1Q00532 357 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 DPTQ07507 201 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 GRIK2Q13002 908 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 GINS1Q14691 196 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 CCDC80Q76M96 950 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 ZNF619Q8N2I2 560 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 FTMTQ8N4E7 242 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 PJA1Q8NG27 643 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 MUCL1Q96DR8 90 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 MSLNLQ96KJ4 702 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 FAM129BQ96TA1 746 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 NTMT1Q9BV86 223 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 NGBQ9NPG2 151 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 DNAJC27Q9NZQ0 273 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 GGT3PA6NGU5 568 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 HSPA12AO43301 675 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 RAB36O95755 333 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 PRKACGP22612 351 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 OR3A3P47888 321 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 OR3A2P47893 321 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 SLC3A1Q07837 685 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 MADCAM1Q13477 382 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 TRIP6Q15654 476 aaKnown RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 ABHD12BQ7Z5M8 362 aaPredicted RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 SPRED2Q7Z698 418 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 ZBTB46Q86UZ6 589 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 VRK3Q8IV63 474 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 CDS1Q92903 461 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 MPP4Q96JB8 637 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 OR4K3Q96R72 315 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 MKS1Q9NXB0 559 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 SLC7A11Q9UPY5 501 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 NME7Q9Y5B8 376 aa9.16□□□□□ -0.94
GABPA-201ENST00000354828 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
GABPA-201ENST00000354828 A0A1W2PRQ8 180 aa9.15□□□□□ -0.94
GABPA-201ENST00000354828 GATBO75879 557 aaKnown RBP9.15□□□□□ -0.94
GABPA-201ENST00000354828 MRPL3P09001 348 aaKnown RBP9.15□□□□□ -0.94
GABPA-201ENST00000354828 S1PR1P21453 382 aa9.15□□□□□ -0.94
GABPA-201ENST00000354828 PEX2P28328 305 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms