RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 GAL3ST4Q96RP7 486 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 KRT12Q99456 494 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 PRDM14Q9GZV8 571 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 MYLK2Q9H1R3 596 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 Q9H521 79 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 JKAMPQ9P055 326 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ANGPTL3Q9Y5C1 460 aa10.24□□□□□ -0.77
RTN3-204ENST00000354497 ANK3Q12955 4377 aaKnown RBP10.23□□□□□ -0.77
RTN3-204ENST00000354497 SYNDIG1LA6NDD5 238 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 MBD3L3A6NE82 208 aaPredicted RBP10.23□□□□□ -0.77
RTN3-204ENST00000354497 CD8B2A6NJW9 211 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 M0QX08 132 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 CASQ2O14958 399 aaPredicted RBP10.23□□□□□ -0.77
RTN3-204ENST00000354497 MAGEB3O15480 346 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 GSC2O15499 205 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 CTNSO60931 367 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 ETHE1O95571 254 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 ZCCHC18P0CG32 403 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 PTH2RP49190 550 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 LIM2P55344 173 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 MPEG1Q2M385 716 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 PAQR3Q6TCH7 311 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 SATL1Q86VE3 508 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 THOC6Q86W42 341 aaKnown RBP10.23□□□□□ -0.77
RTN3-204ENST00000354497 CADM3Q8N126 398 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 MAPK1IP1LQ8NDC0 245 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 MBD3L2Q8NHZ7 208 aaPredicted RBP10.23□□□□□ -0.77
RTN3-204ENST00000354497 DOK4Q8TEW6 326 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 FBXL8Q96CD0 374 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 DIABLOQ9NR28 239 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 FGFR1OP2Q9NVK5 253 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 DCAF16Q9NXF7 216 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 KLHL28Q9NXS3 571 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 CNIH4Q9P003 139 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 VTI1BQ9UEU0 232 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 TRIM33Q9UPN9 1127 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 TESMINQ9Y4I5 508 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 NPFFR2Q9Y5X5 522 aa10.23□□□□□ -0.77
RTN3-204ENST00000354497 SCO2O43819 266 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 H2AFYO75367 372 aaKnown RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 SULT1C4O75897 302 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 KRT75O95678 551 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 CRYZL1O95825 349 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 IL18BPO95998 194 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 CYP4B1P13584 511 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 COX7A2P14406 83 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 ANPEPP15144 967 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 CDH2P19022 906 aaPredicted RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 TPSB2P20231 275 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 RPL21P46778 160 aaKnown RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 MASP1P48740 699 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 EIF2B2P49770 351 aaKnown RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 AP1S2P56377 157 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 SERTAD2Q14140 314 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 TRIP13Q15645 432 aaPredicted RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 TPSAB1Q15661 275 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 EIPR1Q53HC9 387 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 DCST1Q5T197 706 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 C6orf163Q5TEZ5 329 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 TRIM40Q6P9F5 258 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 IZUMO2Q6UXV1 221 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 C4orf22Q6V702 233 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 SYDE1Q6ZW31 735 aaPredicted RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 C9orf40Q8IXQ3 194 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 GCNT2Q8N0V5 402 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 TMCO5AQ8N6Q1 288 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 ZNF441Q8N8Z8 693 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 OR6Y1Q8NGX8 325 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 OR2W6PQ8NHA6 318 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 CEP70Q8NHQ1 597 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 ZFP28Q8NHY6 868 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 ZNF721Q8TF20 911 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 DIO2Q92813 273 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 INTS12Q96CB8 462 aaKnown RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 MS4A6EQ96DS6 147 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 WDYHV1Q96HA8 205 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 DGAT2Q96PD7 388 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 FMO2Q99518 471 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 SFXN3Q9BWM7 321 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 UGT2B28Q9BY64 529 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 PROK2Q9HC23 129 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 SH2D2AQ9NP31 389 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 IARS2Q9NSE4 1012 aaKnown RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 NDE1Q9NXR1 346 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 TAS2R13Q9NYV9 303 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 MOCS1Q9NZB8 636 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 FBXO5Q9UKT4 447 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 CNOT11Q9UKZ1 510 aaKnown RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 SLC22A14Q9Y267 594 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 CHCHD2Q9Y6H1 151 aaPredicted RBP10.22□□□□□ -0.77
RTN3-204ENST00000354497 ATRQ13535 2644 aa10.22□□□□□ -0.77
RTN3-204ENST00000354497 EML6Q6ZMW3 1958 aa10.21□□□□□ -0.77
RTN3-204ENST00000354497 KIAA1549Q9HCM3 1950 aa10.21□□□□□ -0.77
RTN3-204ENST00000354497 NCKAP5O14513 1909 aa10.21□□□□□ -0.77
RTN3-204ENST00000354497 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 H0Y3Z8 333 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 CYR61O00622 381 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 DYRK3O43781 588 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 ALX3O95076 343 aa10.21□□□□□ -0.78
RTN3-204ENST00000354497 TNFAIP8O95379 198 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 357 ms