RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CCSAPQ6IQ19 270 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-201ENST00000353479 TLDC1Q6P9B6 456 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 SBSNQ6UWP8 590 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 AKAP14Q86UN6 197 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 LHFPL3Q86UP9 236 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 SLC5A8Q8N695 610 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 C20orf27Q9GZN8 174 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 TMEM185BQ9H7F4 350 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 TUBA8Q9NY65 449 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-201ENST00000353479 SLC7A7Q9UM01 511 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 H0Y8X5 98 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 RUNDC3AQ59EK9 446 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 KCTD18Q6PI47 426 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-201ENST00000353479 PLEKHG7Q6ZR37 379 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 MAMDC2Q7Z304 686 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-201ENST00000353479 FAM160A2Q8N612 972 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-201ENST00000353479 OR52E2Q8NGJ4 325 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 FGF14Q92915 247 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 TRIM63Q969Q1 353 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 DDIT4LQ96D03 193 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 LRR1Q96L50 414 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 BMFQ96LC9 184 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 CLMPQ9H6B4 373 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 PDFQ9HBH1 243 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 RPH3AQ9Y2J0 694 aaPredicted RBP14.07□□□□□ -0.16
COL17A1-201ENST00000353479 HS3ST3A1Q9Y663 406 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 TMX2-CTNND1H3BSU7 103 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 CELP19835 753 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 F8A1P23610 371 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 MAP2K4P45985 399 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 SCRN3Q0VDG4 424 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 BNIP3Q12983 259 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 C6orf141Q5SZD1 244 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 DCST2Q5T1A1 773 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 LRIF1Q5T3J3 769 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 CPZQ66K79 652 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 FAM118AQ9NWS6 357 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 COL4A5P29400 1685 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 BRWD3Q6RI45 1802 aa14.07□□□□□ -0.16
COL17A1-201ENST00000353479 SRPX2O60687 465 aaPredicted RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ALDOCP09972 364 aaKnown RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 GKN3PP0CG01 181 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 CPMP14384 443 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 EEF1A2Q05639 463 aaKnown RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 DLX2Q07687 328 aaPredicted RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 BCL7AQ4VC05 210 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 AFMIDQ63HM1 303 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ARHGAP11AQ6P4F7 1023 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 TMEM184AQ6ZMB5 413 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ZNF675Q8TD23 568 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 EPHX3Q9H6B9 360 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 SCRG1O75711 98 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 RETP07949 1114 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 S1PR1P21453 382 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 MAPK3P27361 379 aaPredicted RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 GMFBP60983 142 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 OR4K13Q8NH42 304 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 TBC1D20Q96BZ9 403 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 MROQ9BYG7 248 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 TMEM181Q9P2C4 612 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ERVK-18Q9QC07 812 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 VDAC3Q9Y277 283 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 MITFO75030 526 aaPredicted RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 GATBO75879 557 aaKnown RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 AIFM1O95831 613 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 VBP1P61758 197 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 CCSMST1Q4G0I0 132 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ASB18Q6ZVZ8 466 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ZNF227Q86WZ6 799 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 METTL4Q8N3J2 472 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 SLC44A3Q8N4M1 653 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 PROKR1Q8TCW9 393 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 LY75O60449 1722 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 FOXE1O00358 373 aaPredicted RBP14.06□□□□□ -0.16
COL17A1-201ENST00000353479 SFTPDP35247 375 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 SLCO4C1Q6ZQN7 724 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 AGBL5Q8NDL9 886 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 ZNF740Q8NDX6 193 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 FGF22Q9HCT0 170 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 H3BML4 177 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 WRBO00258 174 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 SLCO2B1O94956 709 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 GPR75O95800 540 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 CCNJQ5T5M9 372 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 Q6ZNB5 142 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 MED28Q9H204 178 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 RIMS3Q9UJD0 308 aa14.06□□□□□ -0.16
COL17A1-201ENST00000353479 H0YIV9 168 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 TUBA4AP68366 448 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 RIN1Q13671 783 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 GGTA1PQ4G0N0 100 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 UBE2Q1Q7Z7E8 422 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 OR51Q1Q8NH59 317 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 OR1E3Q8WZA6 343 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 ADOQ96SZ5 270 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 FOXQ1Q9C009 403 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 PCDHA9Q9Y5H5 950 aa14.05□□□□□ -0.16
COL17A1-201ENST00000353479 COL11A2P13942 1736 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms