RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TBC1D17Q9HA65 648 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 POLE4Q9NR33 117 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 TNFRSF10DQ9UBN6 386 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ACSL6Q9UKU0 697 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 UNC119BA6NIH7 251 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CASKO14936 926 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CPNE3O75131 537 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 JRKO75564 520 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 JMJD7P0C870 316 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SNTA1Q13424 505 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 MICAQ29983 383 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ANKDD1AQ495B1 522 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 FUNDC1Q8IVP5 155 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CIDECQ96AQ7 238 aaPredicted RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CPMP14384 443 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF823P16415 610 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 PLCXD2Q0VAA5 305 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SLC30A6Q6NXT4 461 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF367Q7RTV3 350 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ASCC1Q8N9N2 400 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 FNDC8Q8TC99 324 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 C12orf43Q96C57 262 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SMAD5Q99717 465 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 COMMD4Q9H0A8 199 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM38AQ9H6F2 299 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 MAP10Q9P2G4 905 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 ZFR2Q9UPR6 939 aaKnown RBP11.48□□□□□ -0.57
SMAD9-201ENST00000350148 CBY1Q9Y3M2 126 aa11.48□□□□□ -0.57
SMAD9-201ENST00000350148 SLC9B1P1A6NJY1 282 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 C2CD4DB7Z1M9 353 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 DIRAS1O95057 198 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 TGFBR2P37173 567 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 DCTP40126 519 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 UGT8Q16880 541 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 VWA5B2Q8N398 1253 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 MR1Q95460 341 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PEX11GQ96HA9 241 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 FGF22Q9HCT0 170 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 RIMS3Q9UJD0 308 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 TLCD2A6NGC4 264 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 H0YGG7 62 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PGRMC2O15173 223 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 SNAP29O95721 258 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ZNF41P51814 821 aaPredicted RBP11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ARF3P61204 181 aaPredicted RBP11.47□□□□□ -0.57
SMAD9-201ENST00000350148 POU4F2Q12837 409 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 MCEMP1Q8IX19 187 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PSD4Q8NDX1 1056 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 OR2T33Q8NG76 320 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 OR13H1Q8NG92 308 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PNPLA2Q96AD5 504 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 DUS3LQ96G46 650 aaKnown RBP11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ARPC5LQ9BPX5 153 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 KLRF1Q9NZS2 232 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 NDUFAF4Q9P032 175 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 DOCK3Q8IZD9 2030 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 K7ESM1 405 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 BRINP1O60477 761 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 RAB36O95755 333 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ITGAMP11215 1152 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 GPX2P18283 190 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 OR1E2P47887 323 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 DEFB133Q30KQ1 61 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 LIN54Q6MZP7 749 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 TMEM64Q6YI46 380 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ABHD11Q8NFV4 315 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 FBXL20Q96IG2 436 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ALOXE3Q9BYJ1 711 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 METTL7AQ9H8H3 244 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 LRIT1Q9P2V4 623 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 MMACHCQ9Y4U1 282 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 AGAP14A8MT82 685 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 SULT1B1O43704 296 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PCDHGA12O60330 932 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 MOSPD3O75425 235 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PRKACGP22612 351 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PSMB5P28074 263 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 OR2B6P58173 313 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 GPLD1P80108 840 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 B4GALNT1Q00973 533 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ABHD17CQ6PCB6 329 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 SYCE2Q6PIF2 218 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 KCT2Q8NC54 265 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 WDR20Q8TBZ3 569 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 ZFP90Q8TF47 636 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 KIAA1143Q96AT1 154 aaPredicted RBP11.47□□□□□ -0.57
SMAD9-201ENST00000350148 TM4SF18Q96CE8 201 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 NEURL3Q96EH8 262 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 MUS81Q96NY9 551 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 TRNT1Q96Q11 434 aaKnown RBP11.47□□□□□ -0.57
SMAD9-201ENST00000350148 SSX3Q99909 188 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 PRRG4Q9BZD6 226 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 A4GALTQ9NPC4 353 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 CTPS2Q9NRF8 586 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 IKZF2Q9UKS7 526 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 SLC35A3Q9Y2D2 325 aa11.47□□□□□ -0.57
SMAD9-201ENST00000350148 A0A1W2PPW3 197 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 SOCS2O14508 198 aa11.46□□□□□ -0.57
SMAD9-201ENST00000350148 CD72P21854 359 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms