RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 COPZ2Q9P299 210 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 TMEM225BP0DP42 221 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 CST5P28325 142 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 TDGQ13569 410 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 KLBQ86Z14 1044 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 OR9A2Q8NGT5 310 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 TANKQ92844 425 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 ATOH1Q92858 354 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 MUS81Q96NY9 551 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF576Q9H609 170 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 CCDC86Q9H6F5 360 aaKnown RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 CPNE7Q9UBL6 633 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 PTBP2Q9UKA9 531 aaKnown RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 MYO9BQ13459 2157 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 MAGEA8P43361 318 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 ERVPABLB-1P60509 514 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 HDAC2Q92769 488 aaKnown RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 MYRFLQ96LU7 910 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 NENFQ9UMX5 172 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 DNAJC15Q9Y5T4 150 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 ABOP16442 354 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 DEFA5Q01523 94 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 SPAG16Q8N0X2 631 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 FAM46BQ96A09 425 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 TRMT2BQ96GJ1 504 aaKnown RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 UHRF1Q96T88 793 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 TUBA1CQ9BQE3 449 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 REV1Q9UBZ9 1251 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 ABCG2Q9UNQ0 655 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 HIF3AQ9Y2N7 669 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 A0A0U1RQS6 177 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 H3BSA7 217 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 M0R036 132 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 SULT2B1O00204 365 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 GJA4P35212 333 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 MC3RP41968 323 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 RBM39Q14498 530 aaKnown RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 ISCA2Q86U28 154 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 OR7G3Q8NG95 312 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 NSG1A0A0A6YYJ2 146 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 MPPED1O15442 326 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 POU3F2P20265 443 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-202ENST00000342494 ELK4P28324 431 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 WNT7BP56706 349 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 NKX3-2P78367 333 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 CTBSQ01459 385 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 PLGLAQ15195 96 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 UGT8Q16880 541 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 PDLIM7Q9NR12 457 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 AP1M2Q9Y6Q5 423 aa14.22□□□□□ -0.13
UBE3B-202ENST00000342494 CNOT4O95628 575 aaKnown RBP14.21□□□□□ -0.13
UBE3B-202ENST00000342494 MAS1P04201 325 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 SH3BP2P78314 561 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 BDH1Q02338 343 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 MAB21L1Q13394 359 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 SNIP1Q8TAD8 396 aaKnown RBP14.21□□□□□ -0.13
UBE3B-202ENST00000342494 GATAD2BQ8WXI9 593 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 SNAP29O95721 258 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 RAC2P15153 192 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 TIMP2P16035 220 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 HTR6P50406 440 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF33BQ06732 778 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 FAM78AQ5JUQ0 283 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 MRPL21Q7Z2W9 205 aaKnown RBP14.21□□□□□ -0.13
UBE3B-202ENST00000342494 ABHD12BQ7Z5M8 362 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-202ENST00000342494 RHBDF1Q96CC6 855 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 ERVK-19Q9WJR5 959 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 NUMBLQ9Y6R0 609 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 H0YAE9 185 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 UGDHO60701 494 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 CD68P34810 354 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-202ENST00000342494 TGFBR3Q03167 851 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 VTCN1Q7Z7D3 282 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 CNEP1R1Q8N9A8 125 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 OR4K5Q8NGD3 323 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 FIZ1Q96SL8 496 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 KCNN3Q9UGI6 736 aa14.21□□□□□ -0.13
UBE3B-202ENST00000342494 TRAV6A0A075B6T7 132 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 PRKXP51817 358 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 NPRL3Q12980 569 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 APOFQ13790 326 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 CDHR3Q6ZTQ4 885 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 C3orf58Q8NDZ4 430 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 OR5J2Q8NH18 312 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 CD200R1Q8TD46 325 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 L3HYPDHQ96EM0 354 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 SLC45A3Q96JT2 553 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 ACTR6Q9GZN1 396 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 OR6C2Q9NZP2 312 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 NAALAD2Q9Y3Q0 740 aa14.21□□□□□ -0.14
UBE3B-202ENST00000342494 PHRF1Q9P1Y6 1649 aaKnown RBP14.21□□□□□ -0.14
UBE3B-202ENST00000342494 ANTXRLA6NF34 631 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 ARHGEF15O94989 841 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 HPRP00739 348 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 PNMTP11086 282 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 NFATC4Q14934 902 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 PLBD1Q6P4A8 553 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 SHFQ7M4L6 423 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 TRIM46Q7Z4K8 759 aa14.2□□□□□ -0.14
UBE3B-202ENST00000342494 ELMOD2Q8IZ81 293 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms