RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PPP1CAP62136 330 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 CSNK2BP67870 215 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 SPEM2Q0P670 501 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 NPTX1Q15818 432 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 DCST1Q5T197 706 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 GTF2IRD2BQ6EKJ0 949 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 TCEAL6Q6IPX3 200 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 KLHL35Q6PF15 583 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 OLIG3Q7RTU3 272 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 C16orf62Q7Z3J2 963 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ZNF438Q7Z4V0 828 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 GTF2IRD2Q86UP8 949 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 OR4D11Q8NGI4 311 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 TCEAL3Q969E4 200 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 MS4A4EQ96PG1 132 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 DCUN1D5Q9BTE7 237 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ACTRT3Q9BYD9 372 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 GAREM1Q9H706 876 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 LYRM4Q9HD34 91 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 PARD6AQ9NPB6 346 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 PRDM9Q9NQV7 894 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 IMPAD1Q9NX62 359 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 CALML5Q9NZT1 146 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 RNF6Q9Y252 685 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 PCDHGB1Q9Y5G3 927 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 CSNK1G3Q9Y6M4 447 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 FAM227AF5H4B4 570 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 M0R3H8 397 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 CASC3O15234 703 aaKnown RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 RGS10O43665 173 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 OR10H3O60404 316 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 PIAS2O75928 621 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ADAP00813 363 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 GASTP01350 101 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ZNF12P17014 697 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ELAVL4P26378 380 aaKnown RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 TMBIM6P55061 237 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 VSX2P58304 361 aaPredicted RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 EMX1Q04741 257 aaPredicted RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 COL9A2Q14055 689 aaPredicted RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 ELOCQ15369 112 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 CLPPQ16740 277 aaPredicted RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 ZNF829Q3KNS6 432 aaPredicted RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 FAM111BQ6SJ93 734 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 DBX2Q6ZNG2 339 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 FAM92BQ6ZTR7 304 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ASCL5Q7RTU5 278 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 KANSL1Q7Z3B3 1105 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 HMGN2P46Q86SG4 172 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 LACC1Q8IV20 430 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 OR4N5Q8IXE1 308 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 OR7G2Q8NG99 324 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ADAMTS15Q8TE58 950 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 RAB2BQ8WUD1 216 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 APH1BQ8WW43 257 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 IPCEF1Q8WWN9 437 aaPredicted RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 RORBQ92753 470 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 MUL1Q969V5 352 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 TRNT1Q96Q11 434 aaKnown RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 NAA50Q9GZZ1 169 aaKnown RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 PALMDQ9NP74 551 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 FAIMQ9NVQ4 179 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 ERVK-18Q9QC07 812 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 SLC13A4Q9UKG4 626 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 POMT2Q9UKY4 750 aa10.38□□□□□ -0.75
LRP1-202ENST00000338962 MRPS2Q9Y399 296 aaKnown RBP10.38□□□□□ -0.75
LRP1-202ENST00000338962 CEP192Q8TEP8 1941 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 TDRD6O60522 2096 aaKnown RBP10.37□□□□□ -0.75
LRP1-202ENST00000338962 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 FAAHO00519 579 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 CDX4O14627 284 aaPredicted RBP10.37□□□□□ -0.75
LRP1-202ENST00000338962 OXSR1O95747 527 aaPredicted RBP10.37□□□□□ -0.75
LRP1-202ENST00000338962 CPMP14384 443 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 PCMT1P22061 227 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 MAN2A2P49641 1150 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 PIN1Q13526 163 aaPredicted RBP10.37□□□□□ -0.75
LRP1-202ENST00000338962 SF3A2Q15428 464 aaKnown RBP10.37□□□□□ -0.75
LRP1-202ENST00000338962 FAM214AQ32MH5 1076 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 C6orf132Q5T0Z8 1188 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 ZNF770Q6IQ21 691 aaPredicted RBP10.37□□□□□ -0.75
LRP1-202ENST00000338962 KLHL17Q6TDP4 642 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 USP53Q70EK8 1073 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 AHSA2Q719I0 299 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 PRSS41Q7RTY9 318 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 SLC25A45Q8N413 288 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 SVOPQ8N4V2 548 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 SAP25Q8TEE9 199 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 GIMAP5Q96F15 307 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 DHRS1Q96LJ7 313 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 WFDC6Q9BQY6 131 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 RHNO1Q9BSD3 238 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 PINK1Q9BXM7 581 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 QRSL1Q9H0R6 528 aaKnown RBP10.37□□□□□ -0.75
LRP1-202ENST00000338962 SEMA6CQ9H3T2 930 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 IL21RQ9HBE5 538 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 ACAD8Q9UKU7 415 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 DOLKQ9UPQ8 538 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 CLCA2Q9UQC9 943 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 KCNE3Q9Y6H6 103 aa10.37□□□□□ -0.75
LRP1-202ENST00000338962 CACNA1EQ15878 2313 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms