RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 FGF17O60258 216 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CNOT3O75175 753 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 GPX5O75715 221 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 GNSP15586 552 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 PCSK2P16519 638 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 NT5EP21589 574 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 MPIP34949 423 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SOX18P35713 384 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 STXBP1P61764 594 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 MAT1AQ00266 395 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 TGM3Q08188 693 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 HTR4Q13639 388 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 NFATC4Q14934 902 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 MAPK14Q16539 360 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 DUSP5Q16690 384 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 UBE2UQ5VVX9 321 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 FCRL6Q6DN72 434 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ZNF425Q6IV72 752 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CDC73Q6P1J9 531 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ZNF730Q6ZMV8 503 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SLC46A3Q7Z3Q1 461 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 TAF8Q7Z7C8 310 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 LHFPL3Q86UP9 236 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 PAQR7Q86WK9 346 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 DEPDC4Q8N2C3 294 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 C7orf57Q8NEG2 295 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 FAM46DQ8NEK8 389 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 OR6Q1Q8NGQ2 317 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ADAMTS15Q8TE58 950 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 TRUB1Q8WWH5 349 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 CNDP2Q96KP4 475 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 GPR174Q9BXC1 333 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 KIR3DX1Q9H7L2 352 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 FAM60AQ9NP50 221 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 HRASLS2Q9NWW9 162 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 NCKAP1Q9Y2A7 1128 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CSNK1G3Q9Y6M4 447 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 COLEC10Q9Y6Z7 277 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 FUOMA2VDF0 154 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 A8MU76 341 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 C2CD4DB7Z1M9 353 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 H0YGG7 62 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CSO75390 466 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 THY1P04216 161 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 HBQ1P09105 142 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CT62P0C5K7 136 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CLEC2LP0C7M8 214 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SLC35G6P0C7Q6 338 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 CPMP14384 443 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ETV5P41161 510 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ETV1P50549 477 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 RGS8P57771 180 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 ARF3P61204 181 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 TBCEQ15813 527 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 TBC1D25Q3MII6 688 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 MRM1Q6IN84 353 aaKnown RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 FIGLAQ6QHK4 219 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 HSDL2Q6YN16 418 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SLC22A16Q86VW1 577 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 PARGQ86W56 976 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SYT14Q8NB59 555 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 MFSD9Q8NBP5 474 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 GRHL3Q8TE85 626 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SLC37A2Q8TED4 501 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 GATAD2BQ8WXI9 593 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 COX4I2Q96KJ9 171 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ZNF681Q96N22 645 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 C1QTNF7Q9BXJ2 289 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SNTG1Q9NSN8 517 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ACSS1Q9NUB1 689 aaPredicted RBP8.29□□□□□ -1.08
SNCA-201ENST00000336904 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ACTR10Q9NZ32 417 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 SLC9A8Q9Y2E8 581 aa8.29□□□□□ -1.08
SNCA-201ENST00000336904 ANKRD33BA6NCL7 494 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 E9PQ18 207 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 DVL2O14641 736 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 SDC3O75056 442 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 RDH16O75452 317 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ALPPP05187 535 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 FHP07954 510 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 DRD2P14416 443 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ALOX12P18054 663 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 EIF2DP41214 584 aaKnown RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 RXRGP48443 463 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 HMGA2P52926 109 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ZMAT1Q5H9K5 638 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ENTPD8Q5MY95 495 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 SPATC1Q76KD6 591 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 CROCCP3Q8IVE0 287 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 UBE2J2Q8N2K1 259 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 DRAXINQ8NBI3 349 aaPredicted RBP8.28□□□□□ -1.08
SNCA-201ENST00000336904 OR4F15Q8NGB8 312 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 OR52P1PQ8NH57 321 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 CLIP3Q96DZ5 547 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 GABRG3Q99928 467 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ENKD1Q9H0I2 346 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 HMG20AQ9NP66 347 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 ATP13A2Q9NQ11 1180 aa8.28□□□□□ -1.08
SNCA-201ENST00000336904 FAIMQ9NVQ4 179 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms