RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 STACQ99469 402 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 DUSP22Q9NRW4 184 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 WDR70Q9NW82 654 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 GPR55Q9Y2T6 319 aaPredicted RBP19.94■□□□□ 0.78
TPM1-204ENST00000334895 TRBV11-1A0A0K0K1C0 115 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 GXYLT2A0PJZ3 443 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 OR6C76A6NM76 312 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 RNF4P78317 190 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 TRIM25Q14258 630 aaKnown RBP19.93■□□□□ 0.78
TPM1-204ENST00000334895 NNATQ16517 81 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 BTBD16Q32M84 506 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 HEPHL1Q6MZM0 1159 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 OLIG3Q7RTU3 272 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 ZNF441Q8N8Z8 693 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 SLC38A5Q8WUX1 472 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 WWTR1Q9GZV5 400 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 GIN1Q9NXP7 522 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 POMPQ9Y244 141 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 CFL2Q9Y281 166 aa19.93■□□□□ 0.78
TPM1-204ENST00000334895 A8MVJ9 347 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 ACOT8O14734 319 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 HPP00738 406 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 NCK1P16333 377 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 GABRA3P34903 492 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 PCGF2P35227 344 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 CLCN2P51788 898 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 Q0VFX4 171 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 EXT1Q16394 746 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 SYPL1Q16563 259 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 ATP1A1-AS1Q5TC04 95 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 HSDL2Q6YN16 418 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 ANKFN1Q8N957 763 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 C11orf65Q8NCR3 313 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 OR4N2Q8NGD1 307 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 NFKBIDQ8NI38 313 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 GPR151Q8TDV0 419 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 ASB9Q96DX5 294 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 CNTNAP3BQ96NU0 1288 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 RAB3IPQ96QF0 476 aaPredicted RBP19.92■□□□□ 0.78
TPM1-204ENST00000334895 GAL3ST4Q96RP7 486 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 EFHD1Q9BUP0 239 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 CNTNAP3Q9BZ76 1288 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 NXF5Q9H1B4 397 aaKnown RBP19.92■□□□□ 0.78
TPM1-204ENST00000334895 MMP25Q9NPA2 562 aa19.92■□□□□ 0.78
TPM1-204ENST00000334895 C2orf92A0A1B0GVN3 265 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 TMEM200CA6NKL6 621 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 DUXAA6NLW8 204 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 BCHEP06276 602 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 GGT1P19440 569 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 PPICP45877 212 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 ANXA11P50995 505 aaKnown RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 CDK6Q00534 326 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 RBBP4Q09028 425 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 BNIP2Q12982 314 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 SCARB2Q14108 478 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 ZNHIT3Q15649 155 aaPredicted RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 ERICH5Q6P6B1 374 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 SLC29A4Q7RTT9 530 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 SLC44A2Q8IWA5 706 aaPredicted RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 FAM13CQ8NE31 585 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 SNIP1Q8TAD8 396 aaKnown RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 M1APQ8TC57 530 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 KCNE4Q8WWG9 221 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 TMEM19Q96HH6 336 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 THUMPD1Q9NXG2 353 aaKnown RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 P2RX2Q9UBL9 471 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 ZFHX4Q86UP3 3567 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 ARPC2O15144 300 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 GCM2O75603 506 aaPredicted RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 ZIC2O95409 532 aaPredicted RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 ZNF630Q2M218 657 aaPredicted RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 COX18Q8N8Q8 333 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 OR8K3Q8NH51 312 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 WDR60Q8WVS4 1066 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 VPS50Q96JG6 964 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 LMF1Q96S06 567 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 RUBCNLQ9H714 662 aa19.91■□□□□ 0.78
TPM1-204ENST00000334895 LIN28AQ9H9Z2 209 aaKnown RBP19.91■□□□□ 0.78
TPM1-204ENST00000334895 TAF4O00268 1085 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 NKX2-8O15522 239 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 CHRM4P08173 479 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 ATP6V1B2P21281 511 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 DRD5P21918 477 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 TRHRP34981 398 aaPredicted RBP19.9■□□□□ 0.78
TPM1-204ENST00000334895 VEZF1Q14119 521 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 RPS26P11Q5JNZ5 115 aaPredicted RBP19.9■□□□□ 0.78
TPM1-204ENST00000334895 CCNJQ5T5M9 372 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 C16orf47Q6ZP98 133 aaPredicted RBP19.9■□□□□ 0.78
TPM1-204ENST00000334895 PROSER1Q86XN7 944 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 ZNF248Q8NDW4 579 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 CHDHQ8NE62 594 aaPredicted RBP19.9■□□□□ 0.78
TPM1-204ENST00000334895 NUBPLQ8TB37 319 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 LCORQ96JN0 433 aaPredicted RBP19.9■□□□□ 0.78
TPM1-204ENST00000334895 BTBD2Q9BX70 525 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 EXD2Q9NVH0 621 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 FBXO34Q9NWN3 711 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 SNX13Q9Y5W8 968 aa19.9■□□□□ 0.78
TPM1-204ENST00000334895 CDC14CA4D256 554 aa19.89■□□□□ 0.77
TPM1-204ENST00000334895 FRG2CA6NGY1 282 aa19.89■□□□□ 0.77
TPM1-204ENST00000334895 TTC36A6NLP5 189 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms