RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 OCA2Q04671 838 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 DAG1Q14118 895 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 ZNHIT3Q15649 155 aaPredicted RBP20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 IQCCQ4KMZ1 466 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 RBM44Q6ZP01 1051 aaKnown RBP20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 LAPTM4BQ86VI4 370 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 GPR32P1Q8NGA4 272 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 ZNF354BQ96LW1 612 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 ADI1Q9BV57 179 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 MKLN1Q9UL63 735 aa20.2■□□□□ 0.82
TOP1MT-201ENST00000329245 PRAMEF25A6NGN4 478 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 A8MUA0 341 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 DYRK3O43781 588 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 IFNW1P05000 195 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 ALPLP05186 524 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 EMDP50402 254 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 KCNC4Q03721 635 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 MERTKQ12866 999 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 CCNJQ5T5M9 372 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 COX15Q7KZN9 410 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 TMEM151BQ8IW70 566 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 C7orf57Q8NEG2 295 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 ZNF347Q96SE7 839 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 AMBRA1Q9C0C7 1298 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 REEP1Q9H902 201 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 FOLH1BQ9HBA9 442 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 FAM32AQ9Y421 112 aaKnown RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 WDR45Q9Y484 360 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 HEMK1Q9Y5R4 338 aaPredicted RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 IGKV3D-11A0A0A0MRZ8 115 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 PRAMEF2O60811 474 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 ALPPP05187 535 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 CCL4P13236 92 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 CHN2P52757 468 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 FUT7Q11130 342 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 PUM1Q14671 1186 aaKnown RBP eCLIP20.19■□□□□ 0.821e-7■■■□□ 16.4
TOP1MT-201ENST00000329245 EXOSC6Q5RKV6 272 aaKnown RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 DCST2Q5T1A1 773 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 TMEM154Q6P9G4 183 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 SHISA6Q6ZSJ9 500 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 TSEN54Q7Z6J9 526 aaKnown RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 CARM1Q86X55 608 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 STT3BQ8TCJ2 826 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 PTPMT1Q8WUK0 201 aaPredicted RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 ZG16BQ96DA0 208 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 ZNF300Q96RE9 604 aaPredicted RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 SDF2Q99470 211 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 RSPO3Q9BXY4 272 aaPredicted RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 ANKRD60Q9BZ19 345 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 VN1R1Q9GZP7 353 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 OR10A5Q9H207 317 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 THSD1Q9NS62 852 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 SAMHD1Q9Y3Z3 626 aaKnown RBP20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 CLCA3PQ9Y6N3 262 aa20.19■□□□□ 0.82
TOP1MT-201ENST00000329245 C4orf47A7E2U8 309 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 RRM2P31350 389 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 MAP3K8P41279 467 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 ZNF311Q5JNZ3 666 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 HIPK1Q86Z02 1210 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 BMPERQ8N8U9 685 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 TGIF2Q9GZN2 237 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 MTHFD2LQ9H903 347 aaPredicted RBP20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 AKAP7Q9P0M2 348 aaPredicted RBP20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 TESMINQ9Y4I5 508 aa20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 COL5A1P20908 1838 aaPredicted RBP20.18■□□□□ 0.82
TOP1MT-201ENST00000329245 ZNF318Q5VUA4 2279 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 CBFA2T3O75081 653 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 SOX30O94993 753 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 SNAP29O95721 258 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 HPRP00739 348 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 ZGLP1P0C6A0 271 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 PABPC4LP0CB38 370 aaKnown RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 DNAJA1P31689 397 aaKnown RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 POU6F2P78424 691 aaPredicted RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 FRRS1Q6ZNA5 592 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 CHDHQ8NE62 594 aaPredicted RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 VANGL1Q8TAA9 524 aaPredicted RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 SENP5Q96HI0 755 aaPredicted RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 CMKLR1Q99788 373 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 TRIM45Q9H8W5 580 aaPredicted RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 CACYBPQ9HB71 228 aaKnown RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 SCOCQ9UIL1 159 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 SATB2Q9UPW6 733 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 HCN4Q9Y3Q4 1203 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 DSPPQ9NZW4 1301 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 TCRBV16S1A1N1A0A5B0 115 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 ADAMDEC1O15204 470 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 STX11O75558 287 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 NKX2-2O95096 273 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 ZIC2O95409 532 aaPredicted RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 PRKACGP22612 351 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 GTF2A1P52655 376 aaPredicted RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 EFNA3P52797 238 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 PPP2R2BQ00005 443 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 MC2RQ01718 297 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 TCF15Q12870 199 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 GPR68Q15743 365 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 SLC36A3Q495N2 470 aa20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 TYW3Q6IPR3 259 aaKnown RBP20.17■□□□□ 0.82
TOP1MT-201ENST00000329245 SHQ1Q6PI26 577 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms