RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CT45A8P0DMV1 189 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 CT45A9P0DMV2 189 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 NR2F1P10589 423 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 ITGAMP11215 1152 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 PPIBP23284 216 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 GALNSP34059 522 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 MAN2A2P49641 1150 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 CLCN2P51788 898 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 MS4A2Q01362 244 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 CT45A2Q5DJT8 189 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 CDC73Q6P1J9 531 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 ANKFN1Q8N957 763 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 CDRT4Q8N9R6 151 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 ADAMTS17Q8TE56 1095 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 SLC38A5Q8WUX1 472 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 VMP1Q96GC9 406 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 NTMQ9P121 344 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 MKLN1Q9UL63 735 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 PRPF19Q9UMS4 504 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 CORO2BQ9UQ03 480 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 ELOVL7A1L3X0 281 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 A8MVJ9 347 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 EFSO43281 561 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 TNFRSF21O75509 655 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 DNAJB5O75953 348 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 IGHEP01854 428 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 ME2P23368 584 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 GZMMP51124 257 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 FADDQ13158 208 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 SCARB2Q14108 478 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 LRRC23Q53EV4 343 aaPredicted RBP14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 B3GNTL1Q67FW5 361 aaPredicted RBP14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 TCTN3Q6NUS6 607 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 ZZZ3Q8IYH5 903 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 OR7G1Q8NGA0 311 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 TMEM19Q96HH6 336 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 IMMP1LQ96LU5 166 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 DEFB126Q9BYW3 111 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 RUBCNLQ9H714 662 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 ANKRD10Q9NXR5 420 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 PRODH2Q9UF12 536 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 CD300AQ9UGN4 299 aa14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 DSPP15924 2871 aaKnown RBP14.26□□□□□ -0.13
PDLIM5-202ENST00000318007 FCMRO60667 390 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 ZNF354AO60765 605 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 H6PDO95479 791 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 NQO1P15559 274 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 ITGA3P26006 1051 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 MYBPC3Q14896 1274 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 CYP27C1Q4G0S4 372 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 ZAR1Q86SH2 424 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 SERPINA11Q86U17 422 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 THOC3Q96J01 351 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 P2RX2Q9UBL9 471 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 RAXQ9Y2V3 346 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 C5orf58C9J3I9 102 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 BCAS2O75934 225 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 OR2J2O76002 312 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 CHRM4P08173 479 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 EEFSECP57772 596 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 CDK6Q00534 326 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 GPR68Q15743 365 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 VMACQ2NL98 169 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 DCAF10Q5QP82 559 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 DCST2Q5T1A1 773 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 ATAD3BQ5T9A4 648 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 C1orf146Q5VVC0 180 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 PLAG1Q6DJT9 500 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 LSRQ86X29 649 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 CALHM3Q86XJ0 350 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 SPPL2CQ8IUH8 684 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 MICU2Q8IYU8 434 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 LGI4Q8N135 537 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 BRIX1Q8TDN6 353 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 WDR60Q8WVS4 1066 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 TMBIM1Q969X1 311 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 ADIPOR1Q96A54 375 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 REXO5Q96IC2 774 aaKnown RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 CCNL2Q96S94 520 aaPredicted RBP14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 RAD21L1Q9H4I0 556 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 Q9N2J8 555 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 POMPQ9Y244 141 aa14.25□□□□□ -0.13
PDLIM5-202ENST00000318007 FAM220BPB1ANY3 271 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 IGKV1D-16P01601 117 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 ALPPP05187 535 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 CYC1P08574 325 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 HPCAP84074 193 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 MAPK11Q15759 364 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 EXT1Q16394 746 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 ARHGAP24Q8N264 748 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 ZNF614Q8N883 585 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 SMYD1Q8NB12 490 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 CLEC1AQ8NC01 280 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 C11orf65Q8NCR3 313 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 ELP5Q8TE02 316 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 GATA6Q92908 595 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 ZG16BQ96DA0 208 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 SEMA4CQ9C0C4 833 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 PIGUQ9H490 435 aa14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 CPNE5Q9HCH3 593 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms