RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ATOH1Q92858 354 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-201ENST00000317677 FAM162AQ96A26 154 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 MTERF3Q96E29 417 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 FCRL4Q96PJ5 515 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SLC30A2Q9BRI3 323 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 IFT22Q9H7X7 185 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 C5AR2Q9P296 337 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SPASTQ9UBP0 616 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 ACSL6Q9UKU0 697 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SIT1Q9Y3P8 196 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 A0A0A6YYD5 115 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 H3BUI4 141 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SERPINI2O75830 405 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SERPINA1P01009 418 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 TNFP01375 233 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 WNT1P04628 370 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SERPIND1P05546 499 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 NDUFS1P28331 727 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 CRYBA2P53672 197 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 CASP9P55211 416 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 ARMC4Q5T2S8 1044 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 GARNL3Q5VVW2 1013 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 DGLUCYQ7Z3D6 616 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 DTWD2Q8NBA8 298 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 CNIH3Q8TBE1 160 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 POP5Q969H6 163 aaKnown RBP12.29□□□□□ -0.44
CPNE1-201ENST00000317677 RGMAQ96B86 450 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 DDX31Q9H8H2 851 aaKnown RBP12.29□□□□□ -0.44
CPNE1-201ENST00000317677 WDR70Q9NW82 654 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 AHSPQ9NZD4 102 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 APOBEC3BQ9UH17 382 aaKnown RBP12.29□□□□□ -0.44
CPNE1-201ENST00000317677 SNX11Q9Y5W9 270 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 AP1M2Q9Y6Q5 423 aa12.29□□□□□ -0.44
CPNE1-201ENST00000317677 FAM170BA6NMN3 283 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 WASHC1A8K0Z3 465 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 RPLP0P05388 317 aaKnown RBP12.28□□□□□ -0.44
CPNE1-201ENST00000317677 ADORA3P0DMS8 318 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 DDCP20711 480 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 CMPK1P30085 196 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 UBE2IP63279 158 aaKnown RBP12.28□□□□□ -0.44
CPNE1-201ENST00000317677 S100A12P80511 92 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 IL5RAQ01344 420 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 ASAH1Q13510 395 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 RGNQ15493 299 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 OR4C11Q6IEV9 310 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 ARSKQ6UWY0 536 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 PRSS42Q7Z5A4 293 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 VN1R4Q7Z5H5 301 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 NUDT13Q86X67 352 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 GPALPP1Q8IXQ4 340 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 NAGSQ8N159 534 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 VWA5B2Q8N398 1253 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 KLHL6Q8WZ60 621 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 MS4A6EQ96DS6 147 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 PPA2Q9H2U2 334 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 CHRDQ9H2X0 955 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 SRMSQ9H3Y6 488 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 TMEFF2Q9UIK5 374 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-201ENST00000317677 DIMT1Q9UNQ2 313 aaKnown RBP12.28□□□□□ -0.44
CPNE1-201ENST00000317677 MRPS17Q9Y2R5 130 aaKnown RBP12.28□□□□□ -0.44
CPNE1-201ENST00000317677 ORC6Q9Y5N6 252 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 GOLGA4Q13439 2230 aaKnown RBP12.28□□□□□ -0.44
CPNE1-201ENST00000317677 CEP192Q8TEP8 1941 aa12.28□□□□□ -0.44
CPNE1-201ENST00000317677 TMEM229AB2RXF0 380 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 TBX19O60806 448 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 PRKRAO75569 313 aaKnown RBP12.27□□□□□ -0.44
CPNE1-201ENST00000317677 GCM2O75603 506 aaPredicted RBP12.27□□□□□ -0.44
CPNE1-201ENST00000317677 SLC22A5O76082 557 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 SOX6P35712 828 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 AHRP35869 848 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 LIPAP38571 399 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.448e-7■■■■■ 37
CPNE1-201ENST00000317677 C1orf61Q13536 156 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 RAPSNQ13702 412 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 GALEQ14376 348 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 ARMCX4Q5H9R4 360 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 SLC46A3Q7Z3Q1 461 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 HIPK1Q86Z02 1210 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 MFSD9Q8NBP5 474 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 VPS37AQ8NEZ2 397 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 OR5AK3PQ8NH89 298 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 MAL2Q969L2 176 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 SLC47A1Q96FL8 570 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 NELL2Q99435 816 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 SERHL2Q9H4I8 314 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 CXorf36Q9H7Y0 433 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 PRDM7Q9NQW5 492 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 EVA1BQ9NVM1 165 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 ZNF282Q9UDV7 671 aaPredicted RBP12.27□□□□□ -0.44
CPNE1-201ENST00000317677 ADAM29Q9UKF5 820 aa12.27□□□□□ -0.44
CPNE1-201ENST00000317677 USP34Q70CQ2 3546 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 GON4LQ3T8J9 2241 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 A0A1W2PRB8 838 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 SLC35F4A4IF30 521 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 CCDC182A6NF36 153 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 NOBOXO60393 691 aa12.27□□□□□ -0.45
CPNE1-201ENST00000317677 TNFRSF21O75509 655 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms