RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KMT5CQ86Y97 462 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 ATG16L2Q8NAA4 619 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 OR4C6Q8NH72 309 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SAP25Q8TEE9 199 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 FBLIM1Q8WUP2 373 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CDS1Q92903 461 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SLC41A2Q96JW4 573 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 ZC3H10Q96K80 434 aaKnown RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 GABARAPL3Q9BY60 117 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 GRIP2Q9C0E4 1043 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SPRTNQ9H040 489 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PIGUQ9H490 435 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 KRT84Q9NSB2 600 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 TUBA8Q9NY65 449 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MRPS33Q9Y291 106 aaKnown RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 TGFBR3LH3BV60 316 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 BCKDKO14874 412 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 YKT6O15498 198 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PCDHGA12O60330 932 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CTNSO60931 367 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 NME6O75414 186 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SEC24DO94855 1032 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 LGI1O95970 557 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 ALPPP05187 535 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CT62P0C5K7 136 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PABPC4LP0CB38 370 aaKnown RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MYF5P13349 255 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 ANXA8P13928 327 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 RYKP34925 604 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PDX1P52945 283 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MAT1AQ00266 395 aaKnown RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CHRNEQ04844 493 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MAP4K2Q12851 820 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 KCNAB1Q14722 419 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 ARHGAP11BQ3KRB8 267 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 AMZ1Q400G9 498 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 LIN52Q52LA3 116 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 COLEC12Q5KU26 742 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 RNF220Q5VTB9 566 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 FRRS1Q6ZNA5 592 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MED25Q71SY5 747 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 WDR53Q7Z5U6 358 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 LACC1Q8IV20 430 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SLC5A8Q8N695 610 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CDRT4Q8N9R6 151 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CHDHQ8NE62 594 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PIGKQ92643 395 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CCDC74AQ96AQ1 378 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PEX11GQ96HA9 241 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 STACQ99469 402 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 FEVQ99581 238 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PITX2Q99697 317 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 RIBC2Q9H4K1 309 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 DUSP22Q9NRW4 184 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 IRAK4Q9NWZ3 460 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 TMEM9Q9P0T7 183 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SATB2Q9UPW6 733 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SLC9A8Q9Y2E8 581 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PCDHGA8Q9Y5G5 932 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 CLDN16Q9Y5I7 305 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SETXQ7Z333 2677 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 LY6G6EA0A0G2JKS1 128 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF749O43361 778 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 OR2B3O76000 313 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 CBX7O95931 251 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ALOX5P09917 674 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ATP6V1B1P15313 513 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 FUT4P22083 530 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 CBLP22681 906 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 HOXD12P35452 270 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 CLK3P49761 638 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 NR1H2P55055 460 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ISL1P61371 349 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 HPCAP84074 193 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 SQSTM1Q13501 440 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 GANABQ14697 944 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 NR0B2Q15466 257 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 SYT16Q17RD7 645 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 HLA-BQ31612 363 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF770Q6IQ21 691 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 DHRS4L2Q6PKH6 230 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 DGAT2L6Q6ZPD8 337 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 GATAD2AQ86YP4 633 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 RBM45Q8IUH3 476 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 VWA5B2Q8N398 1253 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 Q8N9G6 341 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 FAM181AQ8N9Y4 354 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 SETD9Q8NE22 299 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 OR52J3Q8NH60 311 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 VANGL1Q8TAA9 524 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 PHF10Q8WUB8 498 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 SLC9A6Q92581 669 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 HDAC2Q92769 488 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 MVB12AQ96EY5 273 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 MMABQ96EY8 250 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ARHGDIGQ99819 225 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 WFDC6Q9BQY6 131 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 FUZQ9BT04 418 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 RBCK1Q9BYM8 510 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ING2Q9H160 280 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms