RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ARL4DP49703 201 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 CDH12P55289 794 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 HSD17B7P56937 341 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 HPCAP84074 193 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 CFHR1Q03591 330 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 NR0B2Q15466 257 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 EXOC3L2Q2M3D2 409 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 LIN52Q52LA3 116 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 ANKRD34AQ69YU3 496 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 LAIR1Q6GTX8 287 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 TCTN3Q6NUS6 607 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 OFCC1Q8IZS5 231 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 LINC00471Q8N535 108 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 CEP76Q8TAP6 659 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 SAP25Q8TEE9 199 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 PITX2Q99697 317 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 ARHGDIGQ99819 225 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 RSPO3Q9BXY4 272 aaPredicted RBP11.21□□□□□ -0.61
TPM3-202ENST00000302206 SPRTNQ9H040 489 aaPredicted RBP11.21□□□□□ -0.61
TPM3-202ENST00000302206 SAP130Q9H0E3 1048 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 ING2Q9H160 280 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 SOX17Q9H6I2 414 aaPredicted RBP11.21□□□□□ -0.61
TPM3-202ENST00000302206 EVA1AQ9H8M9 152 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 EQTNQ9NQ60 294 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 PRTFDC1Q9NRG1 225 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 POFUT2Q9Y2G5 429 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 KCNE3Q9Y6H6 103 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 SCN3AQ9NY46 2000 aa11.21□□□□□ -0.62
TPM3-202ENST00000302206 CNOT1A5YKK6 2376 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 TTC36A6NLP5 189 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 FAAHO00519 579 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 HRO43593 1189 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 PCDHGA12O60330 932 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 OR10H2O60403 315 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 MITFO75030 526 aaPredicted RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 CCNB2O95067 398 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 CLIC3O95833 236 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 THBS1P07996 1170 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 NELFEP18615 380 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 CBLP22681 906 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 CSF2RBP32927 897 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 HLCSP50747 726 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 TPD52P55327 224 aaPredicted RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 NUP107P57740 925 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 ID2Q02363 134 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 CHRNEQ04844 493 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 SERTAD2Q14140 314 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 DUSP5Q16690 384 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 CLPPQ16740 277 aaPredicted RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 TRMT12Q53H54 448 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 TSPYL5Q86VY4 417 aaPredicted RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 VWA5B2Q8N398 1253 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 SLC16A11Q8NCK7 471 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 PHF10Q8WUB8 498 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 CDS1Q92903 461 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 ZNF566Q969W8 418 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 CCDC74AQ96AQ1 378 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 ALPK1Q96QP1 1244 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 FEVQ99581 238 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 DPYSL5Q9BPU6 564 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 APOL4Q9BPW4 351 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 FUZQ9BT04 418 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 RIBC2Q9H4K1 309 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 ZNF768Q9H5H4 540 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 CXorf21Q9HAI6 301 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 CACYBPQ9HB71 228 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 CUTCQ9NTM9 273 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 HCN3Q9P1Z3 774 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 NDRG4Q9ULP0 352 aaKnown RBP11.2□□□□□ -0.62
TPM3-202ENST00000302206 TMCC3Q9ULS5 477 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 CDC14AQ9UNH5 594 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 MMACHCQ9Y4U1 282 aa11.2□□□□□ -0.62
TPM3-202ENST00000302206 A0A1W2PRQ8 180 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 J3KTA2 159 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 FFAR1O14842 300 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 FOXD2O60548 495 aaPredicted RBP11.19□□□□□ -0.62
TPM3-202ENST00000302206 OR2B3O76000 313 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 SEC24DO94855 1032 aaPredicted RBP11.19□□□□□ -0.62
TPM3-202ENST00000302206 NKX2-2O95096 273 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 EPPINO95925 133 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 CBX7O95931 251 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 H1F0P07305 194 aaKnown RBP11.19□□□□□ -0.62
TPM3-202ENST00000302206 ANKRD34CP0C6C1 535 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 S1PR1P21453 382 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 RPS4Y1P22090 263 aaKnown RBP11.19□□□□□ -0.62
TPM3-202ENST00000302206 STT3AP46977 705 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 ALDH3B2P48448 385 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 CLK3P49761 638 aaKnown RBP11.19□□□□□ -0.62
TPM3-202ENST00000302206 GABARAPL2P60520 117 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 CXCR4P61073 352 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 ISL1P61371 349 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 STX4Q12846 297 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 NPRL3Q12980 569 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 DUSP8Q13202 625 aa11.19□□□□□ -0.62
TPM3-202ENST00000302206 SRSF5Q13243 272 aaKnown RBP11.19□□□□□ -0.62
TPM3-202ENST00000302206 DGCR6Q14129 220 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms