RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 PRKACAP17612 351 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 TNNI3P19429 210 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PRPH2P23942 346 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 ETV1P50549 477 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 RORCP51449 518 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 ITGA1P56199 1179 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PER3P56645 1201 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 IRF8Q02556 426 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 CSTF1Q05048 431 aaKnown RBP6.26□□□□□ -1.41
TMC1-201ENST00000297784 GPR18Q14330 331 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 SHBQ15464 509 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 MAPKAPK3Q16644 382 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 HKDC1Q2TB90 917 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 FAM214AQ32MH5 1076 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 ZMAT1Q5H9K5 638 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PRAMEF13Q5VWM6 474 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 FRG2Q64ET8 278 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PMS2CLQ68D20 193 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 NXPE4Q6UWF7 544 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 TMPRSS11BQ86T26 416 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 LAS2Q8IYD9 372 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 OR4E2Q8NGC2 313 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 HUS1BQ8NHY5 278 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 SLC5A11Q8WWX8 675 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 APIPQ96GX9 242 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 FRG2BQ96QU4 278 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 EPYCQ99645 322 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 BEX2Q9BXY8 128 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 SLC29A3Q9BZD2 475 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 BARHL1Q9BZE3 327 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 KIF17Q9P2E2 1029 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 APOBEC3BQ9UH17 382 aaKnown RBP6.26□□□□□ -1.41
TMC1-201ENST00000297784 HSPB11Q9Y547 144 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 DCHS1Q96JQ0 3298 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 FEZF1A0PJY2 475 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 NPIPB8E9PQR5 432 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 H7BY64 318 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PLA2G10O15496 165 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 LCMT2O60294 686 aaKnown RBP6.26□□□□□ -1.41
TMC1-201ENST00000297784 HCN1O60741 890 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 RFPL3O75679 317 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 GPX5O75715 221 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 C9P02748 559 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 FABP3P05413 133 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 FAM157BP0CG42 384 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 C1GALT1C1LP0DN25 315 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 HOXB1P14653 301 aaPredicted RBP6.26□□□□□ -1.41
TMC1-201ENST00000297784 IL1RL1Q01638 556 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 ILF3Q12906 894 aaKnown RBP eCLIP6.26□□□□□ -1.41
TMC1-201ENST00000297784 TSTA3Q13630 321 aaPredicted RBP6.26□□□□□ -1.41
TMC1-201ENST00000297784 TATDN3Q17R31 274 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 AP5B1Q2VPB7 878 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 CACHD1Q5VU97 1274 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 SAXO2Q658L1 398 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PRSS42Q7Z5A4 293 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 GPAT4Q86UL3 456 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 SLC25A45Q8N413 288 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 STX19Q8N4C7 294 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 ATG16L2Q8NAA4 619 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 NLGN4YQ8NFZ3 816 aaPredicted RBP6.26□□□□□ -1.41
TMC1-201ENST00000297784 SLC37A2Q8TED4 501 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 UBASH3BQ8TF42 649 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PPP3R2Q96LZ3 170 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PRAP1Q96NZ9 151 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 TBCDQ9BTW9 1192 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 ASPNQ9BXN1 380 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PPA2Q9H2U2 334 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PTTG3PQ9NZH4 202 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 CNOT2Q9NZN8 540 aaKnown RBP6.26□□□□□ -1.41
TMC1-201ENST00000297784 CPNE7Q9UBL6 633 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PILRBQ9UKJ0 227 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 STUB1Q9UNE7 303 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 ALG5Q9Y673 324 aa6.26□□□□□ -1.41
TMC1-201ENST00000297784 PIPSLA2A3N6 862 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 CASC3O15234 703 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 PPM1DO15297 605 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SLC43A1O75387 559 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SCO1O75880 301 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 STSP08842 583 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 NAT2P11245 290 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 IFI30P13284 250 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ATF4P18848 351 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 AFF3P51826 1226 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 CLDN20P56880 219 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 RRAS2P62070 204 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 SNRPNP63162 240 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 RAE1P78406 368 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 PRDX1Q06830 199 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 MAD2L1Q13257 205 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 GALEQ14376 348 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 PLK5Q496M5 336 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TEX261Q6UWH6 196 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TAF8Q7Z7C8 310 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZZZ3Q8IYH5 903 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ENKURQ8TC29 256 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SELENOMQ8WWX9 145 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 KLHL6Q8WZ60 621 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 FAM120BQ96EK7 910 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 AICDAQ9GZX7 198 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 CLMPQ9H6B4 373 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms