RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ABHD16AO95870 558 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 APOA2P02652 100 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35G6P0C7Q6 338 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 G0S2P27469 103 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ELK4P28324 431 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 HYAL4Q2M3T9 481 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CYP27C1Q4G0S4 372 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 UBE2UQ5VVX9 321 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC6A19Q695T7 634 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC30A6Q6NXT4 461 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC29A4Q7RTT9 530 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 YIPF7Q8N8F6 280 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 COX18Q8N8Q8 333 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR2T4Q8NH00 348 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 DVL3Q92997 716 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SMIM12Q96EX1 92 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF382Q96SR6 550 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PIP5K1AQ99755 562 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CNTN3Q9P232 1028 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF230Q9UIE0 474 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 NPIPA1Q9UND3 350 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 C2CD3Q4AC94 2353 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 HIVEP2P31629 2446 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 IGFBP1P08833 259 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GRPRP30550 384 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GDI1P31150 447 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CDKN2BP42772 138 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CLK2P49760 499 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 GSK3BP49841 420 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RPS14P62263 151 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PSPHP78330 225 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 P2RY14Q15391 338 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 UGT8Q16880 541 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 TOR1AIP1Q5JTV8 583 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 FFAR4Q5NUL3 377 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF467Q7Z7K2 595 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 VRK3Q8IV63 474 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC39A11Q8N1S5 342 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR5M8Q8NGP6 311 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 JOSD2Q8TAC2 188 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 BBS10Q8TAM1 723 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OXER1Q8TDS5 423 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RBM18Q96H35 190 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 NUDT9Q9BW91 350 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PLEKHA2Q9HB19 425 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 TIGARQ9NQ88 270 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ARID2Q68CP9 1835 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 QSER1Q2KHR3 1735 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 A8MUI8 341 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ICAM1P05362 532 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 THBS2P35442 1172 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 TUBP50607 506 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SPIN3Q5JUX0 258 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MFSD14CQ5VZR4 134 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR4A47Q6IF82 309 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF705AQ6ZN79 300 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 NETO2Q8NC67 525 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 OR4A4PQ8NGN8 299 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RASD2Q96D21 266 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CNN2Q99439 309 aaKnown RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 THAP7Q9BT49 309 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 YIPF2Q9BWQ6 316 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MYOZ2Q9NPC6 264 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 KIF26AQ9ULI4 1882 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 FBP1P09467 338 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ANXA4P09525 319 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 HNRNPLP14866 589 aaKnown RBP eCLIP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PPM1AP35813 382 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MAP2K6P52564 334 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 CNTN2Q02246 1040 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PDZK1IP1Q13113 114 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SP140Q13342 867 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 IRF2BP2Q7Z5L9 587 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 PROKR2Q8NFJ6 384 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 SLC7A6Q92536 515 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 UROC1Q96N76 676 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 RANBP9Q96S59 729 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 UHRF1Q96T88 793 aaPredicted RBP4.63□□□□□ -1.67
CSMD3-201ENST00000297405 ATG101Q9BSB4 218 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 KCMF1Q9P0J7 381 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 TEX264Q9Y6I9 313 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 POLQO75417 2590 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 MROH1Q8NDA8 1641 aa4.63□□□□□ -1.67
CSMD3-201ENST00000297405 UMAD1C9J7I0 102 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 TRIM77I1YAP6 450 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 K7EQM0 130 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM63AO94886 807 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 HLA-AP01891 365 aaKnown RBP4.62□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35G4P0C7Q5 338 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 GLUD2P49448 558 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 EPHB3P54753 998 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 ZDHHC14Q8IZN3 488 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 WDR48Q8TAF3 677 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 ZCCHC14Q8WYQ9 949 aaKnown RBP4.62□□□□□ -1.67
CSMD3-201ENST00000297405 SEMA4DQ92854 862 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 RGMAQ96B86 450 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 SGK2Q9HBY8 427 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 E7ESA3 106 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 CCR8P51685 355 aa4.62□□□□□ -1.67
CSMD3-201ENST00000297405 PRPS1P60891 318 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms