RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PADI2Q9Y2J8 665 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 NOX1Q9Y5S8 564 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 MAU2Q9Y6X3 613 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 NARSO43776 548 aaKnown RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 CDC40O60508 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
HPS3-201ENST00000296051 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 RHCEP18577 417 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 AK4P27144 223 aaPredicted RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 GPR4P46093 362 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CASP6P55212 293 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CXCR4P61073 352 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 PPP3R1P63098 170 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.37
HPS3-201ENST00000296051 LRRC37A5PQ49AS3 106 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 RAB41Q5JT25 222 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 PLEKHS1Q5SXH7 462 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 C12orf40Q86WS4 652 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 DNAJC22Q8N4W6 341 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 OR2T35Q8NGX2 323 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 TRIM43Q96BQ3 446 aaPredicted RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 PLEKHA1Q9HB21 404 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 RDH14Q9HBH5 336 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CLDN24A6NM45 220 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 SCAMP2O15127 329 aaKnown RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 CPNE6O95741 557 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 PLATP00750 562 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 S100A6P06703 90 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CD38P28907 300 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 SOX2P48431 317 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 SLC35A2P78381 396 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 TBCEQ15813 527 aaPredicted RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 GDPD3Q7L5L3 318 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 COMMD6Q7Z4G1 85 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CEACAM19Q7Z692 300 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 GATSQ8NAP1 163 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CHST4Q8NCG5 386 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 OR7G3Q8NG95 312 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 MBOAT4Q96T53 435 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 MED31Q9Y3C7 131 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 DOCK2Q92608 1830 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 TEX46H3BTG2 121 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 CLEC2LP0C7M8 214 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 ITGAMP11215 1152 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 ACADLP28330 430 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 PDX1P52945 283 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 OR12D2P58182 307 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 SLC25A24Q6NUK1 477 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 TMPRSS9Q7Z410 1059 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 SLITRK4Q8IW52 837 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 EDAQ92838 391 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 NIPSNAP1Q9BPW8 284 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 CPPED1Q9BRF8 314 aaPredicted RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 SPATA9Q9BWV2 254 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 MVB12BQ9H7P6 319 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 TCF7L1Q9HCS4 588 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 CNIH4Q9P003 139 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 CCL26Q9Y258 94 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 OR7A10O76100 309 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 IL33O95760 270 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 EVI2BP34910 448 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 FAUP35544 74 aaKnown RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 GNALP38405 381 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 P2RY2P41231 377 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 MTNR1AP48039 350 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 SNTB2Q13425 540 aaKnown RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 FLYWCH1Q4VC44 716 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 SYT6Q5T7P8 510 aaPredicted RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 ASPGQ86U10 573 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 GPR26Q8NDV2 337 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 OR6N1Q8NGY5 312 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 TSEN15Q8WW01 171 aaKnown RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 MKKSQ9NPJ1 570 aaPredicted RBP12.72□□□□□ -0.37
HPS3-201ENST00000296051 MAB21L2Q9Y586 359 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 VSTM5A8MXK1 200 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 HPGDSO60760 199 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 NCR1O76036 304 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 ACPPP15309 386 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 HOXC5Q00444 222 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 TRIM61Q5EBN2 209 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 GAREM2Q75VX8 874 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 ANKRD33Q7Z3H0 272 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 UBQLNLQ8IYU4 475 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 CSF3RQ99062 836 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 MCHR1Q99705 422 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 FANCFQ9NPI8 374 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 TRIM36Q9NQ86 728 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 CENPMQ9NSP4 180 aa12.72□□□□□ -0.37
HPS3-201ENST00000296051 METTL15A6NJ78 407 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 HMGN1P05114 100 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 CHRNB1P11230 501 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 FBLP22087 321 aaKnown RBP12.71□□□□□ -0.37
HPS3-201ENST00000296051 MAGEA2P43356 314 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 TBPL1P62380 186 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 DSG2Q14126 1118 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms