RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 NFE2L1Q14494 772 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 ZNF267Q14586 743 aaPredicted RBP9.78□□□□□ -0.84
SKA1-201ENST00000285116 SYT14P1Q58G82 188 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 LILRA6Q6PI73 481 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 COMMD7Q86VX2 200 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 TMEM25Q86YD3 366 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 TBC1D19Q8N5T2 526 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 LRRC17Q8N6Y2 441 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 TMEM203Q969S6 136 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 TM4SF18Q96CE8 201 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 MS4A8Q9BY19 250 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 MGAT4AQ9UM21 535 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 ISM1B1AKI9 464 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 CHP2O43745 196 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 TBX6O95947 436 aaPredicted RBP9.77□□□□□ -0.84
SKA1-201ENST00000285116 CTSLP07711 333 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 ACP2P11117 423 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 BSGP35613 385 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 HSD17B2P37059 387 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 EVX1P49640 407 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 WNT4P56705 351 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 GALEQ14376 348 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 P2RY14Q15391 338 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 AANATQ16613 207 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 CYP27C1Q4G0S4 372 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 ARSIQ5FYB1 569 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 CLLU1Q5K131 121 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 PRAMEF14Q5SWL7 426 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 C9orf50Q5SZB4 431 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 PRAMEF13Q5VWM6 474 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 KHDRBS2Q5VWX1 349 aaKnown RBP9.77□□□□□ -0.84
SKA1-201ENST00000285116 PAQR6Q6TCH4 344 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 PLEKHM3Q6ZWE6 761 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 ADGRF3Q8IZF5 1079 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 ZNF485Q8NCK3 441 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 OR52P1PQ8NH57 321 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 SMPDL3AQ92484 453 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 IRF7Q92985 503 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 PHF21AQ96BD5 680 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 C1GALT1C1Q96EU7 318 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 ZNF582Q96NG8 517 aaPredicted RBP9.77□□□□□ -0.84
SKA1-201ENST00000285116 SLC28A3Q9HAS3 691 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 SLAMF7Q9NQ25 335 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 RABL2AQ9UBK7 228 aaPredicted RBP9.77□□□□□ -0.84
SKA1-201ENST00000285116 FBXO9Q9UK97 447 aaPredicted RBP9.77□□□□□ -0.84
SKA1-201ENST00000285116 NCKAP1Q9Y2A7 1128 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 EXOSC1Q9Y3B2 195 aaKnown RBP9.77□□□□□ -0.84
SKA1-201ENST00000285116 ASB4Q9Y574 426 aa9.77□□□□□ -0.84
SKA1-201ENST00000285116 SPIN1Q9Y657 262 aaPredicted RBP9.77□□□□□ -0.84
SKA1-201ENST00000285116 WDFY3Q8IZQ1 3526 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 COL4A3Q01955 1670 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 CCDC88CQ9P219 2028 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 PLPP1O14494 284 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 SLC30A4O14863 429 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 PAPLNO95428 1278 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 BCHEP06276 602 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 ELFN1P0C7U0 828 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 CFL1P23528 166 aaKnown RBP9.77□□□□□ -0.85
SKA1-201ENST00000285116 ARFIP1P53367 373 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 CASP9P55211 416 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 GRK1Q15835 563 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 TMEM44Q2T9K0 475 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 LEXMQ3ZCV2 418 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 CNKSR3Q6P9H4 555 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 TMEM107Q6UX40 140 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 FAM83HQ6ZRV2 1179 aaPredicted RBP9.77□□□□□ -0.85
SKA1-201ENST00000285116 ABI3BPQ7Z7G0 1075 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 TIGD4Q8IY51 512 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 MORN4Q8NDC4 146 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 OR2L2Q8NH16 312 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 BBS10Q8TAM1 723 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 SLC7A13Q8TCU3 470 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 OTUB2Q96DC9 234 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 MED28Q9H204 178 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 EMC7Q9NPA0 242 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 COQ3Q9NZJ6 369 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 ZNF224Q9NZL3 707 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 P2RX2Q9UBL9 471 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 TNFRSF10DQ9UBN6 386 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 MALT1Q9UDY8 824 aa9.77□□□□□ -0.85
SKA1-201ENST00000285116 GOLGA4Q13439 2230 aaKnown RBP9.77□□□□□ -0.85
SKA1-201ENST00000285116 KDM4EB2RXH2 506 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 SLC9A3R1O14745 358 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 CASC3O15234 703 aaKnown RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 BNIP3LO60238 219 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 OR10H3O60404 316 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 HPGDSO60760 199 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 SERPINI2O75830 405 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 IFNA7P01567 189 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 LRG1P02750 347 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 GABRA5P31644 462 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 FCN2Q15485 313 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 MINDY4Q4G0A6 757 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 FLYWCH1Q4VC44 716 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 CRTC2Q53ET0 693 aaPredicted RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 TMEM215Q68D42 235 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 GPR139Q6DWJ6 353 aa9.76□□□□□ -0.85
SKA1-201ENST00000285116 TYW3Q6IPR3 259 aaKnown RBP9.76□□□□□ -0.85
SKA1-201ENST00000285116 TMEM64Q6YI46 380 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms