RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MS4A4EQ96PG1 132 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 ANKHQ9HCJ1 492 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 THADAQ6YHU6 1953 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 METTL12A8MUP2 240 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 TLR4O00206 839 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 PRKNO60260 465 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 OR10H2O60403 315 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 MED26O95402 600 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 LGI1O95970 557 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 CDK4P11802 303 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 JUNBP17275 347 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 BCKDHBP21953 392 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 CD27P26842 260 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 RGS8P57771 180 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 MAP4K2Q12851 820 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 KCNAB1Q14722 419 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 ELOCQ15369 112 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 AMZ1Q400G9 498 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF770Q6IQ21 691 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 PGBD2Q6P3X8 592 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 STX19Q8N4C7 294 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 MAFAQ8NHW3 353 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 TUBA1CQ9BQE3 449 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 YIPF2Q9BWQ6 316 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 CNIH4Q9P003 139 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 POMT2Q9UKY4 750 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 HSPE1-MOB4S4R3N1 261 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 WDFY3Q8IZQ1 3526 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 A0A0G2JPF8 293 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 HNRNPCL2B2RXH8 293 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 HNRNPCL3B7ZW38 293 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 TOR1BO14657 336 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 HNRNPCL4P0DMR1 293 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 RPS6KA3P51812 740 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 NFATC3Q12968 1075 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 SPCS2Q15005 226 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 RHOXF1Q8NHV9 184 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 RPL3LQ92901 407 aaKnown RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 GPA33Q99795 319 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 IL20RAQ9UHF4 553 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 CHST10O43529 356 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 PROS1P07225 676 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 GKN3PP0CG01 181 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 ACP2P11117 423 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 MAN2A2P49641 1150 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 DYNC1I2Q13409 638 aaKnown RBP16.77■□□□□ 0.28
CAPN1-201ENST00000279247 AQP6Q13520 282 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 GNA13Q14344 377 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 CA13Q8N1Q1 262 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 GGHQ92820 318 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF566Q969W8 418 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 MOAP1Q96BY2 351 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 SEMA6CQ9H3T2 930 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 TBC1D17Q9HA65 648 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 ACOT13Q9NPJ3 140 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 TVP23BQ9NYZ1 205 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 MAU2Q9Y6X3 613 aa16.77■□□□□ 0.28
CAPN1-201ENST00000279247 ARID1BQ8NFD5 2236 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-201ENST00000279247 hCG_2014768A0A024R1R8 64 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 SH3PXD2BA1X283 911 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 CSF2P04141 144 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 CCNYL3P0C7X3 344 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 MMP11P24347 488 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 TRHRP34981 398 aaPredicted RBP16.77■□□□□ 0.27
CAPN1-201ENST00000279247 SOX18P35713 384 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 ENTPD1P49961 510 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 MLLT10P55197 1068 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 VBP1P61758 197 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 CLEC12AQ5QGZ9 265 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 RNF44Q7L0R7 432 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 ZER1Q7Z7L7 766 aa16.77■□□□□ 0.27
CAPN1-201ENST00000279247 ZNF420Q8TAQ5 688 aaPredicted RBP16.77■□□□□ 0.27
CAPN1-201ENST00000279247 MRPS17Q9Y2R5 130 aaKnown RBP16.77■□□□□ 0.27
CAPN1-201ENST00000279247 CYR61O00622 381 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 ST3GAL4Q11206 333 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 CDC73Q6P1J9 531 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 RRM2BQ7LG56 351 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 CLIP3Q96DZ5 547 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 MSANTD3Q96H12 275 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 BCL2L10Q9HD36 194 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 MAN2C1Q9NTJ4 1040 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 CHST2Q9Y4C5 530 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 FAAHO00519 579 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 PEX12O00623 359 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 BCAS1O75363 584 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-201ENST00000279247 GPR75O95800 540 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 BCL10O95999 233 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 ITIH1P19827 911 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 FRRS1Q6ZNA5 592 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 USP53Q70EK8 1073 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 DNAJC22Q8N4W6 341 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 TCEANCQ8N8B7 351 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 COX18Q8N8Q8 333 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 SEMA4GQ9NTN9 838 aa16.76■□□□□ 0.27
CAPN1-201ENST00000279247 CHURC1-FNTBB4DL54 471 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 HRKO00198 91 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 APOL3O95236 402 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 GABRA3P34903 492 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 ARFIP1P53367 373 aa16.75■□□□□ 0.27
CAPN1-201ENST00000279247 DMWDQ09019 674 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms