RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 SMPD3Q9NY59 655 aaPredicted RBP13.55□□□□□ -0.24
TRIM23-202ENST00000274327 SEC14L3Q9UDX4 400 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 HCN4Q9Y3Q4 1203 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 ENPP4Q9Y6X5 453 aa13.55□□□□□ -0.24
TRIM23-202ENST00000274327 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 A8MVJ9 347 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 E2F6O75461 281 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 DNAJB5O75953 348 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 PDX1P52945 283 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 TUBA4AP68366 448 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 CHRNEQ04844 493 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 ZFP36L1Q07352 338 aaKnown RBP13.54□□□□□ -0.24
TRIM23-202ENST00000274327 FUT7Q11130 342 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 FRRS1Q6ZNA5 592 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 PRR23CQ6ZRP0 262 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF605Q86T29 641 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 SATL1Q86VE3 508 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF578Q96N58 590 aaPredicted RBP13.54□□□□□ -0.24
TRIM23-202ENST00000274327 EPYCQ99645 322 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 RBM4BQ9BQ04 359 aaKnown RBP13.54□□□□□ -0.24
TRIM23-202ENST00000274327 LMF2Q9BU23 707 aaKnown RBP13.54□□□□□ -0.24
TRIM23-202ENST00000274327 RBM4Q9BWF3 364 aaKnown RBP13.54□□□□□ -0.24
TRIM23-202ENST00000274327 YIPF2Q9BWQ6 316 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 REEP1Q9H902 201 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 RARRES3Q9UL19 164 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 SATB2Q9UPW6 733 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 SH3GLB1Q9Y371 365 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 U3KQV3 271 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF318Q5VUA4 2279 aa13.54□□□□□ -0.24
TRIM23-202ENST00000274327 NKX2-2O95096 273 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 EPPINO95925 133 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 RRM2P31350 389 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 EMDP50402 254 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 RHAGQ02094 409 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 MERTKQ12866 999 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 C1orf189Q5VU69 101 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 COX15Q7KZN9 410 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 C7orf57Q8NEG2 295 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 PROX1Q92786 737 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 PTCHD1Q96NR3 888 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 RDH12Q96NR8 316 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 SDF2Q99470 211 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 BARD1Q99728 777 aaKnown RBP13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ADI1Q9BV57 179 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 PINK1Q9BXM7 581 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 SMURF2Q9HAU4 748 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 MKKSQ9NPJ1 570 aaPredicted RBP13.53□□□□□ -0.24
TRIM23-202ENST00000274327 SAMHD1Q9Y3Z3 626 aaKnown RBP13.53□□□□□ -0.24
TRIM23-202ENST00000274327 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 HRKO00198 91 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ADAMDEC1O15204 470 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 SOX30O94993 753 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 TIAF1O95411 115 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ONECUT2O95948 504 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 AK1P00568 194 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 IFNW1P05000 195 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ALPPP05187 535 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 EFNA3P52797 238 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 SLC36A3Q495N2 470 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 PHF19Q5T6S3 580 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 MLIPQ5VWP3 458 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ANKRD34AQ69YU3 496 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 TYW3Q6IPR3 259 aaKnown RBP13.53□□□□□ -0.24
TRIM23-202ENST00000274327 COMTD1Q86VU5 262 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 CARM1Q86X55 608 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 OR4D11Q8NGI4 311 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 OR4C15Q8NGM1 316 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 RHBDD1Q8TEB9 315 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ANKRD60Q9BZ19 345 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 ZNF350Q9GZX5 532 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 SAP130Q9H0E3 1048 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 FOLH1BQ9HBA9 442 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 SLC22A11Q9NSA0 550 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 OCIAD1Q9NX40 245 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 UBAP1Q9NZ09 502 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 LYVE1Q9Y5Y7 322 aa13.53□□□□□ -0.24
TRIM23-202ENST00000274327 DMDP11532 3685 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 J3KTA2 159 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 SYT5O00445 386 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 CDX4O14627 284 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-202ENST00000274327 FCMRO60667 390 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 SNAP29O95721 258 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 LGI1O95970 557 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 CLPSP04118 112 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 ZNF806P0C7X5 589 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 FGF5P12034 268 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 RHCEP18577 417 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 PRKACGP22612 351 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 SSTR4P31391 388 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 RORAP35398 523 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 ARHGDIAP52565 204 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 HPCAP84074 193 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 ZNF155Q12901 538 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-202ENST00000274327 ZNF267Q14586 743 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-202ENST00000274327 DCST2Q5T1A1 773 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 PWWP2BQ6NUJ5 590 aa13.52□□□□□ -0.25
TRIM23-202ENST00000274327 B3GNT8Q7Z7M8 397 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms