RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 EXO1Q9UQ84 846 aaKnown RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 JMJD1CQ15652 2540 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 PCNX3Q9H6A9 2034 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 RAI1Q7Z5J4 1906 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 CSPG4Q6UVK1 2322 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 PRAMEF25A6NGN4 478 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 DEFB108AA8MXU0 73 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 H0YC42 278 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 HCRTR2O43614 444 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 ZIC3O60481 467 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 TSPAN2O60636 221 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 RCBTB2O95199 551 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 RHOXF2BP0C7M4 288 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 CT45A8P0DMV1 189 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 CT45A9P0DMV2 189 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 NAGAP17050 411 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 TYK2P29597 1187 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 PEX19P40855 299 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 TMED10P49755 219 aaKnown RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 HTR6P50406 440 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 SERPINB8P50452 374 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 CCNG1P51959 295 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 DGKQP52824 942 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 CDH13P55290 713 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 TPD52P55327 224 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 DCAF7P61962 342 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 PPP2R2AP63151 447 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 PHEXP78562 749 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 SRYQ05066 204 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 PLCXD2Q0VAA5 305 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 UAP1Q16222 522 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 CT45A2Q5DJT8 189 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 SGO1Q5FBB7 561 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 CCNYL2Q5T2Q4 361 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 HLA-DQA1Q5Y7H0 255 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 CAMKMTQ7Z624 323 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 LUZP2Q86TE4 346 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 CIARTQ8N365 385 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 OR4N2Q8NGD1 307 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 GOT1L1Q8NHS2 421 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 RDH11Q8TC12 318 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 TMBIM1Q969X1 311 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 INTS12Q96CB8 462 aaKnown RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 ARSGQ96EG1 525 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 C11orf24Q96F05 449 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 MARK4Q96L34 752 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 VSTM2LQ96N03 204 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 OCSTAMPQ9BR26 566 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 PIGQQ9BRB3 760 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 RBM24Q9BX46 236 aaKnown RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 C1QTNF3Q9BXJ4 246 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 METTL7AQ9H8H3 244 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 WDR41Q9HAD4 459 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 FLRT3Q9NZU0 649 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 GDF2Q9UK05 429 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 SLC12A4Q9UP95 1085 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 GPR55Q9Y2T6 319 aaPredicted RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 UTP11Q9Y3A2 253 aaKnown RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 TESMINQ9Y4I5 508 aa8.11□□□□□ -1.11
TPM3-201ENST00000271850 TNPO3Q9Y5L0 923 aaKnown RBP8.11□□□□□ -1.11
TPM3-201ENST00000271850 ARID1AO14497 2285 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 PRR14LQ5THK1 2151 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 A0A1W2PNV4 684 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 C1orf226A1L170 272 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 SH3D21A4FU49 640 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 FRG2CA6NGY1 282 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 A8MT66 165 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 CAPN14A8MX76 684 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 A8MXE2 369 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 PLOD2O00469 737 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 ERAL1O75616 437 aaKnown RBP8.1□□□□□ -1.11
TPM3-201ENST00000271850 ACTL6AO96019 429 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 FOSL1P15407 271 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 ZNF708P17019 499 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 GCAP28676 217 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 PPICP45877 212 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 MAPK12P53778 367 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 NRG3P56975 720 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 CAV1Q03135 178 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 LTBQ06643 244 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 SNTA1Q13424 505 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 TOMM20Q15388 145 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 OR5M10Q6IEU7 315 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 SLC30A6Q6NXT4 461 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 VWA1Q6PCB0 445 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 ZNF474Q6S9Z5 364 aaPredicted RBP8.1□□□□□ -1.11
TPM3-201ENST00000271850 NUP54Q7Z3B4 507 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 CCDC91Q7Z6B0 441 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 C1orf52Q8N6N3 182 aaKnown RBP8.1□□□□□ -1.11
TPM3-201ENST00000271850 OR9A2Q8NGT5 310 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 ZNF675Q8TD23 568 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 TRPC4APQ8TEL6 797 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 DCAKDQ8WVC6 231 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 KAT2AQ92830 837 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 KLHL29Q96CT2 875 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 STARD4Q96DR4 205 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 SLC35A4Q96G79 324 aa8.1□□□□□ -1.11
TPM3-201ENST00000271850 DACH2Q96NX9 599 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms