RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 PIP5K1AQ99755 562 aa15.04■□□□□ -0
MAP1LC3B-201ENST00000268607 MARVELD1Q9BSK0 173 aa15.04■□□□□ -0
MAP1LC3B-201ENST00000268607 KATNB1Q9BVA0 655 aa15.04■□□□□ -0
MAP1LC3B-201ENST00000268607 VPS29Q9UBQ0 182 aa15.04■□□□□ -0
MAP1LC3B-201ENST00000268607 SH2B3Q9UQQ2 575 aa15.04■□□□□ -0
MAP1LC3B-201ENST00000268607 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 SLC5A10A0PJK1 596 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 GABRR3A8MPY1 467 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 SAP18O00422 153 aaKnown RBP15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 ORC5O43913 435 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 CATP04040 527 aaKnown RBP15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 SSTR2P30874 369 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 PRLHRP49683 370 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 CLCNKAP51800 687 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 MLLT11Q13015 90 aaPredicted RBP15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 C1DQ13901 141 aaKnown RBP15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 IL18Q14116 193 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 HDDC2Q7Z4H3 204 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 TMPRSS11BQ86T26 416 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 ADGRG3Q86Y34 549 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 OR52P1PQ8NH57 321 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 NFKBIDQ8NI38 313 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 RBPMSQ93062 196 aaKnown RBP15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 NEIL2Q969S2 332 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 ELSPBP1Q96BH3 223 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 GIMAP5Q96F15 307 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 SLC6A18Q96N87 628 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 KCNK12Q9HB15 430 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 FZD3Q9NPG1 666 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 GPATCH2Q9NW75 528 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 RDH8Q9NYR8 311 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 PCYT1BQ9Y5K3 369 aaPredicted RBP15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 PRAMEF33A0A0G2JMD5 474 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 TSPAN11A1L157 253 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 NPC1O15118 1278 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 LZTS3O60299 673 aaPredicted RBP15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 HCN1O60741 890 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 HPGDSO60760 199 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 PRAMEF10O60809 474 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 SOD1P00441 154 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 TPOP07202 933 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 GPR1P46091 355 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 ZNF91Q05481 1191 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 GNA13Q14344 377 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 NCF4Q15080 339 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 FCN2Q15485 313 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 SPDYE7PQ495Y7 208 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 KLHL12Q53G59 568 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 PRSS16Q9NQE7 514 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 ING4Q9UNL4 249 aa15.03■□□□□ -0
MAP1LC3B-201ENST00000268607 ISM1B1AKI9 464 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 INMT-MINDY4F8WBC2 141 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 K7EQS6 105 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 PROS1P07225 676 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 LIMS1P48059 325 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 GBX2P52951 348 aaPredicted RBP15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 ACSM2AQ08AH3 577 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 HTR4Q13639 388 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 CPTPQ5TA50 214 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 ACSM2BQ68CK6 577 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 TRMT11Q7Z4G4 463 aaKnown RBP15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 C1orf52Q8N6N3 182 aaKnown RBP15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 WDR20Q8TBZ3 569 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 C1GALT1C1Q96EU7 318 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 DTD2Q96FN9 168 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 KCTD7Q96MP8 289 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 TSSK6Q9BXA6 273 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 MS4A7Q9GZW8 240 aaPredicted RBP15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 PPP1R3EQ9H7J1 279 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 ZFP64Q9NPA5 681 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 PRDM6Q9NQX0 595 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 SPIN1Q9Y657 262 aaPredicted RBP15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 TRPM6Q9BX84 2022 aa15.02■□□□□ -0
MAP1LC3B-201ENST00000268607 OR5K4A6NMS3 321 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 A8MVJ9 347 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SLC43A1O75387 559 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 EGFP01133 1207 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 HLA-DQB1P01920 261 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 FCER2P06734 321 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 C6P13671 934 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 XCR1P46094 333 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SCARB2Q14108 478 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TCEA2Q15560 299 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TUSC1Q2TAM9 212 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CLLU1Q5K131 121 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TAGAPQ8N103 731 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PROKR2Q8NFJ6 384 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 OR4A15Q8NGL6 344 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF480Q8WV37 535 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 LINC00052Q96N35 136 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 USB1Q9BQ65 265 aaKnown RBP15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CDCP1Q9H5V8 836 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 IFT46Q9NQC8 304 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 THSD1Q9NS62 852 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 STON1Q9Y6Q2 735 aa15.02□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SCAMP2O15127 329 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 MID1O15344 667 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SRPRAP08240 638 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 RPS25P62851 125 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 IKZF1Q13422 519 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms