RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 NCBP2P52298 156 aaKnown RBP eCLIP14.68□□□□□ -0.06
USE1-201ENST00000263897 PSPHP78330 225 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 TFF3Q07654 80 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 CRYZQ08257 329 aaKnown RBP14.68□□□□□ -0.06
USE1-201ENST00000263897 VASNQ6EMK4 673 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 ANGPTL8Q6UXH0 198 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 NPSR1Q6W5P4 371 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 MEX3BQ6ZN04 569 aaKnown RBP14.68□□□□□ -0.06
USE1-201ENST00000263897 IKBIPQ70UQ0 350 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 TMCO6Q96DC7 493 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 SLC35A4Q96G79 324 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 FAM111AQ96PZ2 611 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 ADOQ96SZ5 270 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 OSBPL11Q9BXB4 747 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 TUBB1Q9H4B7 451 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 LRTM1Q9HBL6 345 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 GALNT9Q9HCQ5 603 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 KLRF1Q9NZS2 232 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 SLC17A7Q9P2U7 560 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 Q9UFV3 132 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 C19orf53Q9UNZ5 99 aaPredicted RBP14.68□□□□□ -0.06
USE1-201ENST00000263897 DNAJC15Q9Y5T4 150 aa14.68□□□□□ -0.06
USE1-201ENST00000263897 FAM90A27PA6NNH2 459 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 FAM47E-STBD1D6RA91 191 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 PLOD2O00469 737 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 SNPHO15079 494 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 NPHS1O60500 1241 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 SPAG7O75391 227 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 CBR3O75828 277 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 CHEK2O96017 543 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 LINC00032P0C843 101 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 ADH7P40394 386 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 PNLIPRP2P54317 469 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 TOMM20Q15388 145 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 UGT3A2Q3SY77 523 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 EIPR1Q53HC9 387 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 NHSL2Q5HYW2 709 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 WIPI1Q5MNZ9 446 aaPredicted RBP14.67□□□□□ -0.06
USE1-201ENST00000263897 RIPPLY2Q5TAB7 128 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 KANK2Q63ZY3 851 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 SLC44A2Q8IWA5 706 aaPredicted RBP14.67□□□□□ -0.06
USE1-201ENST00000263897 CLYBLQ8N0X4 340 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 WDSUB1Q8N9V3 476 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 OR2T11Q8NH01 316 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 TCP10LQ8TDR4 215 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 CAVIN3Q969G5 261 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 AMDHD1Q96NU7 426 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 TMEM109Q9BVC6 243 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 GLIPR2Q9H4G4 154 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 NPDC1Q9NQX5 325 aaPredicted RBP14.67□□□□□ -0.06
USE1-201ENST00000263897 SLC6A5Q9Y345 797 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 FIS1Q9Y3D6 152 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 TRAF6Q9Y4K3 522 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 POLQO75417 2590 aa14.67□□□□□ -0.06
USE1-201ENST00000263897 DCHS2Q6V1P9 2916 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 PRAMEF25A6NGN4 478 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 UPK1AO00322 258 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 ZNF500O60304 480 aaPredicted RBP14.66□□□□□ -0.06
USE1-201ENST00000263897 COQ9O75208 318 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 EPPINO95925 133 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 CHRNGP07510 517 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 NEFHP12036 1026 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 IGFBP2P18065 325 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 BMP7P18075 431 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 SSTR2P30874 369 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 NTSP30990 170 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 KRT20P35900 424 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 MC3RP41968 323 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 PSG6Q00889 435 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 EFR3AQ14156 821 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 RFTN2Q52LD8 501 aaPredicted RBP14.66□□□□□ -0.06
USE1-201ENST00000263897 ARL13AQ5H913 290 aaPredicted RBP14.66□□□□□ -0.06
USE1-201ENST00000263897 SEM1Q6ZVN7 128 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 LARP4Q71RC2 724 aaKnown RBP eCLIP14.66□□□□□ -0.06
USE1-201ENST00000263897 LIX1LQ8IVB5 337 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 OR2L13Q8N349 312 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 FAM83FQ8NEG4 500 aaPredicted RBP14.66□□□□□ -0.06
USE1-201ENST00000263897 OR4N2Q8NGD1 307 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 ELP4Q96EB1 424 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 C14orf79Q96F83 325 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 FCRL1Q96LA6 429 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 MECRQ9BV79 373 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 PRDM14Q9GZV8 571 aa14.66□□□□□ -0.06
USE1-201ENST00000263897 EML4Q9HC35 981 aaKnown RBP14.66□□□□□ -0.06
USE1-201ENST00000263897 PDZD2O15018 2839 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 FBN2P35556 2912 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 TBX19O60806 448 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 CREB1P16220 341 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 MSX1P28360 303 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 IL12BP29460 328 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 SF3B4Q15427 424 aaKnown RBP eCLIP14.65□□□□□ -0.06
USE1-201ENST00000263897 CYP27C1Q4G0S4 372 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 TMEM107Q6UX40 140 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 YRDCQ86U90 279 aaKnown RBP14.65□□□□□ -0.06
USE1-201ENST00000263897 PLCZ1Q86YW0 608 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 PM20D2Q8IYS1 436 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 RNF138Q8WVD3 245 aa14.65□□□□□ -0.06
USE1-201ENST00000263897 ABTB1Q969K4 478 aaPredicted RBP14.65□□□□□ -0.06
USE1-201ENST00000263897 GFM2Q969S9 779 aaKnown RBP14.65□□□□□ -0.06
USE1-201ENST00000263897 ZNF764Q96H86 408 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 272.8 ms