RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SLC6A19Q695T7 634 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 DESI1Q6ICB0 168 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 SLC2A7Q6PXP3 512 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 NATD1Q8N6N6 113 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 OR4N2Q8NGD1 307 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 PSMA8Q8TAA3 256 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 TM9SF4Q92544 642 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 MS4A4EQ96PG1 132 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 NMUR2Q9GZQ4 415 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 SERHLQ9NQF3 203 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 KLHL1Q9NR64 748 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 LRFN1Q9P244 771 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 PCDHGB7Q9Y5F8 929 aa16.93■□□□□ 0.3
SDF4-201ENST00000263741 RNF103-CHMP3A0A140T963 221 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 DPM1O60762 260 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 CIB2O75838 187 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 IL6P05231 212 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 CT45A8P0DMV1 189 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 CT45A9P0DMV2 189 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 TNFSF10P50591 281 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 KCNK10P57789 538 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 LASP1Q14847 261 aaKnown RBP16.92■□□□□ 0.3
SDF4-201ENST00000263741 GTDC1Q4AE62 458 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 DNAL1Q4LDG9 190 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 SOWAHCQ53LP3 525 aaPredicted RBP16.92■□□□□ 0.3
SDF4-201ENST00000263741 CT45A2Q5DJT8 189 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 PIGGQ5H8A4 983 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 BLOC1S3Q6QNY0 202 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 LYPD8Q6UX82 237 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 CYP4Z2PQ8N1L4 340 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 DNAJC9Q8WXX5 260 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 JADE3Q92613 823 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 SPDL1Q96EA4 605 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 LCORQ96JN0 433 aaPredicted RBP16.92■□□□□ 0.3
SDF4-201ENST00000263741 CCDC115Q96NT0 180 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 PANX1Q96RD7 426 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 C3orf14Q9HBI5 128 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 ARMCX1Q9P291 453 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 PCDHGB4Q9UN71 923 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 CFL2Q9Y281 166 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 SVILO95425 2214 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 BCAS2O75934 225 aaPredicted RBP16.92■□□□□ 0.3
SDF4-201ENST00000263741 NEURL1O76050 574 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 HMGN2P05204 90 aaKnown RBP16.92■□□□□ 0.3
SDF4-201ENST00000263741 SFTPCP11686 197 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 GCKP35557 465 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 CYB561P49447 251 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 PRR5P85299 388 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 PSG6Q00889 435 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 MDGA2Q7Z553 956 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 SLC44A2Q8IWA5 706 aaPredicted RBP16.92■□□□□ 0.3
SDF4-201ENST00000263741 VPS37AQ8NEZ2 397 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 SLC22A8Q8TCC7 542 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 HAS2Q92819 552 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 BTBD9Q96Q07 612 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 RNF32Q9H0A6 362 aa16.92■□□□□ 0.3
SDF4-201ENST00000263741 GPR55Q9Y2T6 319 aaPredicted RBP16.92■□□□□ 0.3
SDF4-201ENST00000263741 NCKAP5O14513 1909 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 CCDC154A6NI56 674 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 A8MVJ9 347 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 ACP2P11117 423 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 ABCD3P28288 659 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 PGM1P36871 562 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 CASRP41180 1078 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 HLCSP50747 726 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 RCN1Q15293 331 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 C6orf10Q5SRN2 563 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 METTL21CQ5VZV1 264 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 MFSD12Q6NUT3 480 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 GALNT10Q86SR1 603 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 MDS2Q8NDY4 140 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 SLC9A6Q92581 669 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 SLC52A3Q9NQ40 469 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 HPF1Q9NWY4 346 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 BTNL2Q9UIR0 455 aa16.91■□□□□ 0.3
SDF4-201ENST00000263741 SMNDC1O75940 238 aaKnown RBP eCLIP16.9■□□□□ 0.32e-6■■■□□ 17.2
SDF4-201ENST00000263741 TRHRP34981 398 aaPredicted RBP16.9■□□□□ 0.3
SDF4-201ENST00000263741 PPICP45877 212 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 FBXW4P57775 412 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 MAPKAPK3Q16644 382 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 PLEKHN1Q494U1 663 aaPredicted RBP16.9■□□□□ 0.3
SDF4-201ENST00000263741 RINLQ6ZS11 566 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 TEX19Q8NA77 164 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 Q8NA96 180 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 SLC16A11Q8NCK7 471 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 PNPT1Q8TCS8 783 aaKnown RBP16.9■□□□□ 0.3
SDF4-201ENST00000263741 PIK3R3Q92569 461 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 SERHL2Q9H4I8 314 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 GPATCH2Q9NW75 528 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 NTMQ9P121 344 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 TAGLN3Q9UI15 199 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 B3GNT3Q9Y2A9 372 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 GXYLT2A0PJZ3 443 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 FRG2CA6NGY1 282 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 G3V3Y1 287 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 RFXANKO14593 260 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 SLC25A12O75746 678 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 RFX3P48380 749 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 PLCXD2Q0VAA5 305 aa16.9■□□□□ 0.3
SDF4-201ENST00000263741 KPNB1Q14974 876 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms