RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 S100A13Q99584 98 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 DDX31Q9H8H2 851 aaKnown RBP15.36■□□□□ 0.05
SREBF1-201ENST00000261646 PLCXD1Q9NUJ7 323 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 TRBV2A0A0J9YWF9 115 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 M0R082 166 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 GABRPO00591 440 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 MMP2P08253 660 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 PCMT1P22061 227 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 LRIF1Q5T3J3 769 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 SERPINA12Q8IW75 414 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 POGLUT1Q8NBL1 392 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 OR8J2Q8NGG1 315 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF514Q96K75 400 aaPredicted RBP15.36■□□□□ 0.05
SREBF1-201ENST00000261646 ALG8Q9BVK2 526 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 ALOXE3Q9BYJ1 711 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 B3GNT4Q9C0J1 378 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 FARSAQ9Y285 508 aaKnown RBP15.36■□□□□ 0.05
SREBF1-201ENST00000261646 AK6Q9Y3D8 172 aaKnown RBP15.36■□□□□ 0.05
SREBF1-201ENST00000261646 NPIPB15A6NHN6 443 aaPredicted RBP15.36■□□□□ 0.05
SREBF1-201ENST00000261646 CCL16O15467 120 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 ACADLP28330 430 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 PTPN6P29350 595 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 CLCNKAP51800 687 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 TM9SF4Q92544 642 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 OR2M2Q96R28 347 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 SORBS1Q9BX66 1292 aaKnown RBP15.36■□□□□ 0.05
SREBF1-201ENST00000261646 PRDM9Q9NQV7 894 aa15.36■□□□□ 0.05
SREBF1-201ENST00000261646 LYARQ9NX58 379 aaKnown RBP15.36■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF840PA6NDX5 716 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 GTF2F2P13984 249 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF30P17039 623 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 ERVK-25P63136 954 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 GPLD1P80108 840 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 GRK1Q15835 563 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 CLPPQ16740 277 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-201ENST00000261646 OR56A1Q8NGH5 318 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 NEIL2Q969S2 332 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 POT1Q9NUX5 634 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF225Q9UK10 706 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 SHROOM3Q8TF72 1996 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 A0A1W2PPL8 197 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 HOXC13P31276 330 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 PTGER1P34995 402 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 E2F1Q01094 437 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 HLA-DQA1Q5Y7H0 255 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 TMCO2Q7Z6W1 182 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-201ENST00000261646 LRRC28Q86X40 367 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-201ENST00000261646 SDR16C5Q8N3Y7 309 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 MS4A15Q8N5U1 240 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 CYB561A3Q8NBI2 242 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 OR52E4Q8NGH9 312 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 TCEAL4Q96EI5 215 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 SAMD8Q96LT4 415 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 ADAD1Q96M93 576 aaKnown RBP15.35■□□□□ 0.05
SREBF1-201ENST00000261646 SLC27A6Q9Y2P4 619 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 M0QZQ0 153 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 UPK1AO00322 258 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 NDUFS4O43181 175 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 SOX30O94993 753 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 PRNPP04156 253 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 RPL34P49207 117 aaKnown RBP15.35■□□□□ 0.05
SREBF1-201ENST00000261646 METAP1DQ6UB28 335 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-201ENST00000261646 OTOP2Q7RTS6 562 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 NPAS4Q8IUM7 802 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 TMEM145Q8NBT3 493 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 OR51L1Q8NGJ5 315 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 OR5D16Q8NGK9 328 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 SLC6A16Q9GZN6 736 aa15.35■□□□□ 0.05
SREBF1-201ENST00000261646 XKRYO14609 159 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 TACSTD2P09758 323 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 CSF3P09919 207 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 DNASE1L1P49184 302 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 HES5Q5TA89 166 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 METTL11BQ5VVY1 283 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SLC25A24Q6NUK1 477 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 KCTD9Q7L273 389 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 GLCCI1Q86VQ1 547 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 ZNF563Q8TA94 476 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 MRPS30Q9NP92 439 aaKnown RBP15.34■□□□□ 0.05
SREBF1-201ENST00000261646 NAT1P18440 290 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 GRK6P43250 576 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SPINT3P49223 89 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 STXBP1P61764 594 aaKnown RBP15.34■□□□□ 0.05
SREBF1-201ENST00000261646 UNC5DQ6UXZ4 953 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 CCDC190Q86UF4 302 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 FOXRED2Q8IWF2 684 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 GIMAP1Q8WWP7 306 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 GLYATL1Q969I3 302 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 OR2A14Q96R47 310 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SLC6A13Q9NSD5 602 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SCN1AP35498 2009 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SLC25A12O75746 678 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 OAZ2O95190 189 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 IDSP22304 550 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 HOXC5Q00444 222 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 MGAT3Q09327 533 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 LMAN2Q12907 356 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 LYPD4Q6UWN0 246 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 LINC01465Q8N7H1 131 aa15.34■□□□□ 0.05
SREBF1-201ENST00000261646 SUN3Q8TAQ9 357 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms