RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ANKRD9Q96BM1 317 aaPredicted RBP21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 TRNT1Q96Q11 434 aaKnown RBP21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 SPRTNQ9H040 489 aaPredicted RBP21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 A4GNTQ9UNA3 340 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 POFUT2Q9Y2G5 429 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 SPACA6W5XKT8 324 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 A0A1W2PQM1 296 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 ARRDC5A6NEK1 342 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 ABCB7O75027 752 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 CCDC159P0C7I6 412 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 POU2F1P14859 743 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 GPLD1P80108 840 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 TOP3AQ13472 1001 aaPredicted RBP21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 RAB39AQ14964 217 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 NEDD8Q15843 81 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 SPARTQ8N0X7 666 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 RNF31Q96EP0 1072 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 PDE7BQ9NP56 450 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 PTGFRNQ9P2B2 879 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 LIPT1Q9Y234 373 aa21.81■■□□□ 1.08
SYNGR3-201ENST00000248121 PCDHGA12O60330 932 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 FCMRO60667 390 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 ZBTB11O95625 1053 aaPredicted RBP21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 GASTP01350 101 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 ELAVL4P26378 380 aaKnown RBP21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 PDX1P52945 283 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 RAB38P57729 211 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 ZNF574Q6ZN55 896 aaPredicted RBP21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 METTL27Q8N6F8 245 aaPredicted RBP21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 AQP11Q8NBQ7 271 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 OR6T1Q8NGN1 323 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 ADAMTS15Q8TE58 950 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 APH1BQ8WW43 257 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 CDS1Q92903 461 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 FUZQ9BT04 418 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 SPATA5L1Q9BVQ7 753 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 ANKHQ9HCJ1 492 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 C19orf53Q9UNZ5 99 aaPredicted RBP21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 CHST2Q9Y4C5 530 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 COMMD3-BMI1R4GMX3 469 aa21.8■■□□□ 1.08
SYNGR3-201ENST00000248121 A0A0A6YYC8 382 aaPredicted RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 I3L1I5 382 aaPredicted RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 FOXS1O43638 330 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 WBP4O75554 376 aaKnown RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 CER1O95813 267 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 ATXN8OSP0DMR3 200 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 SLC5A2P31639 672 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 MGAT2Q10469 447 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 PIN1Q13526 163 aaPredicted RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 SMN1Q16637 294 aaKnown RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 FAM214AQ32MH5 1076 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 PRAMEF17Q5VTA0 474 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 PLXDC1Q8IUK5 500 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 ENTHD1Q8IYW4 607 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 TANKQ92844 425 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 GTPBP3Q969Y2 492 aaKnown RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 ZNF285Q96NJ3 590 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 CD180Q99467 661 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 RSL24D1Q9UHA3 163 aaKnown RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 BLOC1S6Q9UL45 172 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 CHST10O43529 356 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 SRPX2O60687 465 aaPredicted RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 CT62P0C5K7 136 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 ACP2P11117 423 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 GSSP48637 474 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 ESRRGP62508 458 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 NPTX1Q15818 432 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 DUSP5Q16690 384 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 PRICKLE4Q2TBC4 344 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 EXOSC6Q5RKV6 272 aaKnown RBP21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 C16orf62Q7Z3J2 963 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 VRK2Q86Y07 508 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 TAGAPQ8N103 731 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 PINK1Q9BXM7 581 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 RBCK1Q9BYM8 510 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 RASSF1Q9NS23 344 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 PLCL2Q9UPR0 1127 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 FER1L5A0AVI2 2057 aa21.79■■□□□ 1.08
SYNGR3-201ENST00000248121 PTGES3LE9PB15 166 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 H3BMH7 237 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 H1F0P07305 194 aaKnown RBP21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 JUNBP17275 347 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 GGT2P36268 569 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 CCL7P80098 99 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 FGD3Q5JSP0 725 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 ZC3H14Q6PJT7 736 aaKnown RBP21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 FAM181AQ8N9Y4 354 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 SLC9A6Q92581 669 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 RHNO1Q9BSD3 238 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 FANCEQ9HB96 536 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 IRAK4Q9NWZ3 460 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 MAT2BQ9NZL9 334 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 TMEM184BQ9Y519 407 aaPredicted RBP21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 YKT6O15498 198 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 FOLR1P15328 257 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 PCSK6P29122 969 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 CXCR4P61073 352 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 ATAD3BQ5T9A4 648 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 MLIPQ5VWP3 458 aa21.78■■□□□ 1.08
SYNGR3-201ENST00000248121 KLHL17Q6TDP4 642 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms