RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 ABCA12Q86UK0 2595 aa19.33■□□□□ 0.69
HCFC1R1-201ENST00000248089 C2orf72A6NCS6 295 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 NPIPB8E9PQR5 432 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 LSM1O15116 133 aaKnown RBP19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 TYROBPO43914 113 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 BPGMP07738 259 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 SDC1P18827 310 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 HSPB3Q12988 150 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 RFTN2Q52LD8 501 aaPredicted RBP19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 B3GNT6Q6ZMB0 384 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 RNF165Q6ZSG1 346 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 ACAD11Q709F0 780 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 CCDC71Q8IV32 467 aaPredicted RBP19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 SLC44A2Q8IWA5 706 aaPredicted RBP19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 CLYBLQ8N0X4 340 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 OR10Q1Q8NGQ4 319 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 OR1J4Q8NGS1 313 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 ASB5Q8WWX0 329 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 PKNOX2Q96KN3 472 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 FCRL1Q96LA6 429 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 AMDHD1Q96NU7 426 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 ADOQ96SZ5 270 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 RUBCNLQ9H714 662 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 TAS2R7Q9NYW3 318 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 MAPRE3Q9UPY8 281 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 FAM215AQ9Y5M1 114 aa19.33■□□□□ 0.68
HCFC1R1-201ENST00000248089 A0A087WV62 115 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 OR6C70A6NIJ9 312 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 PDPK1O15530 556 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 WDR1O75083 606 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 ICOSLGO75144 302 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 SLITRK5O94991 958 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 FGF4P08620 206 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 PRF1P14222 555 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 ELAVL4P26378 380 aaKnown RBP19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 CHRNB4P30926 498 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 CDK9P50750 372 aaKnown RBP19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 C1orf185Q5T7R7 199 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 TIGD3Q6B0B8 471 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 SLC30A6Q6NXT4 461 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 LARP4Q71RC2 724 aaKnown RBP eCLIP19.32■□□□□ 0.682e-7■■□□□ 11.6
HCFC1R1-201ENST00000248089 MCEMP1Q8IX19 187 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 PPP1R14CQ8TAE6 165 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 CIDECQ96AQ7 238 aaPredicted RBP19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 EFHD2Q96C19 240 aaPredicted RBP19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 PPCDCQ96CD2 204 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 TMCO6Q96DC7 493 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 UBQLN3Q9H347 655 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 GIMAP2Q9UG22 337 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 BAIAP2L1Q9UHR4 511 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 RAB21Q9UL25 225 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 SLC6A5Q9Y345 797 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 DCHS2Q6V1P9 2916 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 HCFC1P51610 2035 aa19.32■□□□□ 0.68
HCFC1R1-201ENST00000248089 SNPHO15079 494 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 CTIFO43310 598 aaKnown RBP19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 SKAP2O75563 359 aaPredicted RBP19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 HPNP05981 417 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 PTPN6P29350 595 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 ARRB2P32121 409 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 PTGDSP41222 190 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 UGT3A2Q3SY77 523 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 RTL6Q6ICC9 239 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 TMEM81Q6P7N7 255 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 ZNF551Q7Z340 670 aaPredicted RBP19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 WDR53Q7Z5U6 358 aaPredicted RBP19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 OR4N2Q8NGD1 307 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 TTYH2Q9BSA4 534 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 REEP4Q9H6H4 257 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 SERHLQ9NQF3 203 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 C19orf53Q9UNZ5 99 aaPredicted RBP19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 TMED5Q9Y3A6 229 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 APCP25054 2843 aa19.31■□□□□ 0.68
HCFC1R1-201ENST00000248089 WDR91A4D1P6 747 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 NKX2-6A6NCS4 301 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 UPK1AO00322 258 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 TSPAN2O60636 221 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 ABCB7O75027 752 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 GLI4P10075 376 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 GPC1P35052 558 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 SERPINB5P36952 375 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 ETV4P43268 484 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 PSPHP78330 225 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 SNTA1Q13424 505 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 EFR3AQ14156 821 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 EIPR1Q53HC9 387 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 ZNF385BQ569K4 471 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 WIPI1Q5MNZ9 446 aaPredicted RBP19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 CEP85LQ5SZL2 805 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 SZRD1Q7Z422 152 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 NUDCD3Q8IVD9 361 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 HOMEZQ8IX15 550 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 ELP4Q96EB1 424 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 SLC35A4Q96G79 324 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 EQTNQ9NQ60 294 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 SH3BP4Q9P0V3 963 aa19.3■□□□□ 0.68
HCFC1R1-201ENST00000248089 MED12Q93074 2177 aa19.29■□□□□ 0.68
HCFC1R1-201ENST00000248089 PLOD2O00469 737 aa19.29■□□□□ 0.68
HCFC1R1-201ENST00000248089 PEX11AO75192 247 aa19.29■□□□□ 0.68
HCFC1R1-201ENST00000248089 BCKDHAP12694 445 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms