RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CACNA1GO43497 2377 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 NCOR1O75376 2440 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 SPTA1P02549 2419 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 LOC105369274A0A096LPK9 316 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ZC3H12DA2A288 527 aaKnown RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 C11orf98E9PRG8 122 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 CPNE6O95741 557 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 FBXO45P0C2W1 286 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ARAFP10398 606 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 HOXD12P35452 270 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 CTF1Q16619 201 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 BTBD16Q32M84 506 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ZMAT1Q5H9K5 638 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 CNIH2Q6PI25 160 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 AMIGO1Q86WK6 493 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 OR4N4Q8N0Y3 316 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 TSEN15Q8WW01 171 aaKnown RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 CDS1Q92903 461 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 SMARCD2Q92925 531 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 NEDD4LQ96PU5 975 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 MED31Q9Y3C7 131 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 TRAV27A0A087WT01 109 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 A0A1W2PQ72 361 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 SLCO2B1O94956 709 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 SMAD2Q15796 467 aaKnown RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 TBCEQ15813 527 aaPredicted RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 FLYWCH1Q4VC44 716 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 PPP2R2DQ66LE6 453 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 OR2T33Q8NG76 320 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 OR56A1Q8NGH5 318 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 PHOSPHO1Q8TCT1 267 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 MVB12BQ9H7P6 319 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 TAAR2Q9P1P5 351 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 STUB1Q9UNE7 303 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 GFYI3L273 518 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 TMPRSS11DO60235 418 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 KLF8O95600 359 aaPredicted RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 HTR1AP08908 422 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 ZNF888P0CJ79 500 aaPredicted RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 GSTM3P21266 225 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 RPS19P39019 145 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 EIF1AXP47813 144 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 GRSF1Q12849 480 aaKnown RBP eCLIP12.92□□□□□ -0.34
NCLN-201ENST00000246117 RUNX3Q13761 415 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 SYT6Q5T7P8 510 aaPredicted RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 JAZF1Q86VZ6 243 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 ISG20Q96AZ6 181 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 MSLNLQ96KJ4 702 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 GINS4Q9BRT9 223 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 ALOXE3Q9BYJ1 711 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 SLC17A9Q9BYT1 436 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 DUSP21Q9H596 190 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 MYEF2Q9P2K5 600 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 HCN2Q9UL51 889 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 UGT2A1Q9Y4X1 527 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 OR51B4Q9Y5P0 310 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 OR2A25A4D2G3 310 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 MCIDASD6RGH6 385 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 H0Y8X5 98 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 SMLR1H3BR10 107 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 VEGFDO43915 354 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 HMGN1P05114 100 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 MAOBP27338 520 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 HOXC8P31273 242 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 P2RY2P41231 377 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 MAP2K3P46734 347 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 EIF4EBP2Q13542 120 aaPredicted RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 ZNF181Q2M3W8 571 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 TMEM215Q68D42 235 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 ZNF776Q68DI1 518 aaPredicted RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 SFRP4Q6FHJ7 346 aaPredicted RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 FAM111BQ6SJ93 734 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 SLC46A3Q7Z3Q1 461 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 TMEM150AQ86TG1 271 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 RBM12BQ8IXT5 1001 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 CHTF18Q8WVB6 975 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 MBNL1Q9NR56 388 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 ACER3Q9NUN7 267 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 NDRG4Q9ULP0 352 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 MRPS33Q9Y291 106 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 MAGEB4O15481 346 aaPredicted RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 PRKYO43930 277 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 UGDHO60701 494 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 DNAJB5O75953 348 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 SEMA3DO95025 777 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 ADH7P40394 386 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 HENMT1Q5T8I9 393 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 TOMM5Q8N4H5 51 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 NDC1Q9BTX1 674 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 GLIPR2Q9H4G4 154 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
NCLN-201ENST00000246117 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
NCLN-201ENST00000246117 EIF3FO00303 357 aaPredicted RBP12.91□□□□□ -0.34
NCLN-201ENST00000246117 EMC8O43402 210 aa12.91□□□□□ -0.34
NCLN-201ENST00000246117 LCMT2O60294 686 aaKnown RBP12.91□□□□□ -0.34
NCLN-201ENST00000246117 NTN1O95631 604 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms