RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GDPD1Q8N9F7 314 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 CPXM1Q96SM3 734 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 RANGRFQ9HD47 186 aaPredicted RBP10.59□□□□□ -0.71
MSH6-201ENST00000234420 ZDHHC2Q9UIJ5 367 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 ADAMTS6Q9UKP5 1117 aa10.59□□□□□ -0.71
MSH6-201ENST00000234420 RNGTTO60942 597 aaKnown RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 MT-ND2P03891 347 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RAD52P43351 418 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 IRF5Q13568 498 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 DUSP28Q4G0W2 176 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 ZPBP2Q6X784 338 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 HORMAD2Q8N7B1 307 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 JOSD2Q8TAC2 188 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 NPRL2Q8WTW4 380 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 CTRCQ99895 268 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 WDR18Q9BV38 432 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 CDH20Q9HBT6 801 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 EPHA6Q9UF33 1036 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 MEIOCA2RUB1 952 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 H7C1Q1 480 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 HEXAP06865 529 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 MNX1P50219 401 aaPredicted RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 UFM1P61960 85 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 OR8B8Q15620 311 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RABL3Q5HYI8 236 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 METTL11BQ5VVY1 283 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 ALDH16A1Q8IZ83 802 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 OSTF1Q92882 214 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 C12orf57Q99622 126 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 ANKRD10Q9NXR5 420 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 SCN1AP35498 2009 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 MYO5BQ9ULV0 1848 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 SCN3AQ9NY46 2000 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 PPP1R2P9O14990 202 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 FBXO24O75426 580 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 PTPRRQ15256 657 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RAB41Q5JT25 222 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 LANCL3Q6ZV70 420 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 KLBQ86Z14 1044 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 CMIPQ8IY22 773 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 TMEFF1Q8IYR6 380 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 SCCPDHQ8NBX0 429 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 PAPD5Q8NDF8 572 aaKnown RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 OR6N2Q8NGY6 317 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 IRGQQ8WZA9 623 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 FAM173AQ9BQD7 235 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 PCBD2Q9H0N5 130 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 OR51J1Q9H342 316 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 SMCO4Q9NRQ5 59 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 CRISP1P54107 249 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RPS21P63220 83 aaKnown RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 DOC2AQ14183 400 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 TRAM2Q15035 370 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 ABHD11Q8NFV4 315 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 OR13J1Q8NGT2 312 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 NT5C3BQ969T7 300 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 TSPAN11A1L157 253 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 GLSO94925 669 aaPredicted RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 F11P03951 625 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 UBBP0CG47 229 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 UBCP0CG48 685 aaKnown RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 EN2P19622 333 aaPredicted RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 CRHBPP24387 322 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 GDF1P27539 372 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 GRM5P41594 1212 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 DPP6P42658 865 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RRAS2P62070 204 aaPredicted RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 SPOCK1Q08629 439 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 MGAT3Q09327 533 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RNASE10Q5GAN6 216 aaKnown RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 TRMT10BQ6PF06 316 aaKnown RBP10.58□□□□□ -0.72
MSH6-201ENST00000234420 OR14J1Q9UGF5 321 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 LRP5LA4QPB2 252 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 GAS6Q14393 721 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 BAIAP2L2Q6UXY1 529 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 FAM185AQ8N0U4 392 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 SUV39H2Q9H5I1 410 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 RLIMQ9NVW2 624 aa10.58□□□□□ -0.72
MSH6-201ENST00000234420 BICRAQ9NZM4 1560 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 TNFRSF10AO00220 468 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 RAB33AQ14088 237 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 CHRNA6Q15825 494 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PCGF3Q3KNV8 242 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 TMEM119Q4V9L6 283 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 FAM180BQ6P0A1 224 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 CEACAM20Q6UY09 585 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PLPPR4Q7Z2D5 763 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 C16orf78Q8WTQ4 265 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 KLRG1Q96E93 195 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 PITHD1Q9GZP4 211 aaPredicted RBP10.57□□□□□ -0.72
MSH6-201ENST00000234420 SFXN1Q9H9B4 322 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 SDHAF2Q9NX18 166 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 ANKMY1Q9P2S6 941 aa10.57□□□□□ -0.72
MSH6-201ENST00000234420 TESQ9UGI8 421 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms