RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CCR5P51681 352 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 RAB40BQ12829 278 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC9A5Q14940 896 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 KIAA0895LQ68EN5 471 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 TMPRSS11AQ6ZMR5 421 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 RBM45Q8IUH3 476 aaKnown RBP23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 PHC2Q8IXK0 858 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 FAM181AQ8N9Y4 354 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 MORN4Q8NDC4 146 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 IL17RDQ8NFM7 739 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR4K5Q8NGD3 323 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR2L8Q8NGY9 312 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 BBS4Q96RK4 519 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 TIMM29Q9BSF4 260 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 SARGQ9BW04 601 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 SYNDIG1Q9H7V2 258 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 CALML5Q9NZT1 146 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 TRPC4Q9UBN4 977 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 CLEC2DQ9UHP7 191 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 PRKAB1Q9Y478 270 aa23.4■■□□□ 1.34
RUNDC3A-201ENST00000225441 CCDC88CQ9P219 2028 aa23.39■■□□□ 1.34
RUNDC3A-201ENST00000225441 TMEM129A0AVI4 362 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 FEZF1A0PJY2 475 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 MMP11P24347 488 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 AHRP35869 848 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 CASP3P42574 277 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 GINS1Q14691 196 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 AGAP6Q5VW22 663 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 ZER1Q7Z7L7 766 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 SRFBP1Q8NEF9 429 aaKnown RBP23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 GNPDA2Q8TDQ7 276 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 RLN3Q8WXF3 142 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 AGAP4Q96P64 663 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 KCNS3Q9BQ31 491 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 RMI1Q9H9A7 625 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 TVP23BQ9NYZ1 205 aa23.39■■□□□ 1.33
RUNDC3A-201ENST00000225441 IGHV1OR15-9A0A0B4J2B8 117 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 POM121BA6NF01 834 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 IGHV4-34P06331 123 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 HBQ1P09105 142 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 SPNP16150 400 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 TNNI3P19429 210 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 CLCNKAP51800 687 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 CLDN2P57739 230 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 PIN1Q13526 163 aaPredicted RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 SYT14P1Q58G82 188 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 ZNF544Q6NX49 715 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 HSDL2Q6YN16 418 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 CAMKK1Q8N5S9 505 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 OR52I1Q8NGK6 324 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 ZNF582Q96NG8 517 aaPredicted RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 GPR174Q9BXC1 333 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 MVB12BQ9H7P6 319 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 MAN2C1Q9NTJ4 1040 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 LIPT1Q9Y234 373 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 TLX2O43763 284 aaPredicted RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 FHP07954 510 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 HOXC4P09017 264 aaPredicted RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 GAAP10253 952 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 CKMT1AP12532 417 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 MYL12AP19105 171 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 AKT2P31751 481 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 NCBP2P52298 156 aaKnown RBP eCLIP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 PSPHP78330 225 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 MRM1Q6IN84 353 aaKnown RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 FAM180BQ6P0A1 224 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 FRMD1Q8N878 549 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC25A46Q96AG3 418 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 NECAB3Q96P71 396 aaPredicted RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 FERD3LQ96RJ6 166 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 IER2Q9BTL4 223 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 TRIM45Q9H8W5 580 aaPredicted RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 CA5BQ9Y2D0 317 aa23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 EXOSC1Q9Y3B2 195 aaKnown RBP23.38■■□□□ 1.33
RUNDC3A-201ENST00000225441 PRODHO43272 600 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 PRKYO43930 277 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 LCMT2O60294 686 aaKnown RBP23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 COQ9O75208 318 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 NR2F6P10588 404 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 ACP2P11117 423 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 PKLRP30613 574 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 IFNA8P32881 189 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 FEN1P39748 380 aaKnown RBP23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 SOX3P41225 446 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 NDUFA5Q16718 116 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC36A4Q6YBV0 504 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 CLIP4Q8N3C7 705 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 LINC01555Q8NAE3 123 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 TMEM163Q8TC26 289 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 KIAA1143Q96AT1 154 aaPredicted RBP23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 HOXD1Q9GZZ0 328 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 C5AR2Q9P296 337 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 SLC17A4Q9Y2C5 497 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 CMAHPQ9Y471 501 aa23.37■■□□□ 1.33
RUNDC3A-201ENST00000225441 CEACAM5P06731 702 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 IGFBP1P08833 259 aaPredicted RBP23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 PSMB5P28074 263 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 CXCL12P48061 93 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 KIAA1024LP59773 190 aa23.36■■□□□ 1.33
RUNDC3A-201ENST00000225441 PRR5P85299 388 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms