RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ANKRD13BQ86YJ7 626 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 SIX5Q8N196 739 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 OR52P1PQ8NH57 321 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 MYDGFQ969H8 173 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 SLC38A3Q99624 504 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 DCUN1D5Q9BTE7 237 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 MIR1-1HGQ9H1L0 117 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 NDOR1Q9UHB4 597 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 A0A1W2PPW3 197 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 RDH16O75452 317 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 HNRNPKP61978 463 aaKnown RBP eCLIP27.75■■■□□ 2.03
PABPN1-201ENST00000216727 COX10Q12887 443 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 INAVAQ3KP66 663 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 MORN4Q8NDC4 146 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 ANKRD9Q96BM1 317 aaPredicted RBP27.75■■■□□ 2.03
PABPN1-201ENST00000216727 MAP3K3Q99759 626 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 KLHL28Q9NXS3 571 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 CLCA2Q9UQC9 943 aa27.75■■■□□ 2.03
PABPN1-201ENST00000216727 LMO7DNF2Z398 122 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 AQP9O43315 295 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 CTSBP07858 339 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 NT5EP21589 574 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 MGAT2Q10469 447 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 TARDBPQ13148 414 aaKnown RBP eCLIP27.74■■■□□ 2.03
PABPN1-201ENST00000216727 NDUFA9Q16795 377 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 TYW3Q6IPR3 259 aaKnown RBP27.74■■■□□ 2.03
PABPN1-201ENST00000216727 NLGN4XQ8N0W4 816 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 OR9A4Q8NGU2 314 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 HSPA12BQ96MM6 686 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 POLR2J3Q9H1A7 115 aaKnown RBP27.74■■■□□ 2.03
PABPN1-201ENST00000216727 MAT2BQ9NZL9 334 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 ENPP5Q9UJA9 477 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 WDR45Q9Y484 360 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 SKP1P63208 163 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 ALDH6A1Q02252 535 aaKnown RBP27.74■■■□□ 2.03
PABPN1-201ENST00000216727 NFATC3Q12968 1075 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 TMEM236Q5W0B7 351 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 NIPAL1Q6NVV3 410 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 OGFOD3Q6PK18 319 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 CDRT4Q8N9R6 151 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 OR4K5Q8NGD3 323 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 GGHQ92820 318 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 CTHRC1Q96CG8 243 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 BCL7BQ9BQE9 202 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 DUSP22Q9NRW4 184 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 SATB2Q9UPW6 733 aa27.74■■■□□ 2.03
PABPN1-201ENST00000216727 SH3D21A4FU49 640 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 FADS2O95864 444 aaKnown RBP27.73■■■□□ 2.03
PABPN1-201ENST00000216727 CNR2P34972 360 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 SLX4IPQ5VYV7 408 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 SLC16A12Q6ZSM3 486 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 CLDN23Q96B33 292 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 STACQ99469 402 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 SDF2Q99470 211 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 ADAP2Q9NPF8 381 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 MKLN1Q9UL63 735 aa27.73■■■□□ 2.03
PABPN1-201ENST00000216727 GPR55Q9Y2T6 319 aaPredicted RBP27.73■■■□□ 2.03
PABPN1-201ENST00000216727 CHST10O43529 356 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 SLC35E2P0CK97 266 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 POU1F1P28069 291 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 PUS10Q3MIT2 529 aaKnown RBP27.72■■■□□ 2.03
PABPN1-201ENST00000216727 C1orf94Q6P1W5 598 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 PEX5LQ8IYB4 626 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 ZNF285Q96NJ3 590 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 ZNF350Q9GZX5 532 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 ANKRD19PQ9H560 264 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 ALOX5P09917 674 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 TAS2R41P59536 307 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 COL9A2Q14055 689 aaPredicted RBP27.72■■■□□ 2.03
PABPN1-201ENST00000216727 UBE2UQ5VVX9 321 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 SLC36A4Q6YBV0 504 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 CCDC81Q6ZN84 652 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 ZER1Q7Z7L7 766 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 FCGR1BQ92637 280 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 SPACA7Q96KW9 195 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 CACYBPQ9HB71 228 aaKnown RBP27.72■■■□□ 2.03
PABPN1-201ENST00000216727 ZNF232Q9UNY5 417 aa27.72■■■□□ 2.03
PABPN1-201ENST00000216727 ZNF443Q9Y2A4 671 aaPredicted RBP27.72■■■□□ 2.03
PABPN1-201ENST00000216727 TPST2O60704 377 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 CDK1P06493 297 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 MAP3K8P41279 467 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 DUSP8Q13202 625 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 PTCHD4Q6ZW05 846 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 DIO2Q92813 273 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 SLC38A4Q969I6 547 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 SLC6A14Q9UN76 642 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 SCN2AQ99250 2005 aa27.71■■■□□ 2.03
PABPN1-201ENST00000216727 TMX2-CTNND1H3BSU7 103 aa27.7■■■□□ 2.03
PABPN1-201ENST00000216727 CDK4P11802 303 aa27.7■■■□□ 2.03
PABPN1-201ENST00000216727 MMP11P24347 488 aa27.7■■■□□ 2.03
PABPN1-201ENST00000216727 ST13P50502 369 aaKnown RBP27.7■■■□□ 2.03
PABPN1-201ENST00000216727 CLIP4Q8N3C7 705 aa27.7■■■□□ 2.03
PABPN1-201ENST00000216727 SAP130Q9H0E3 1048 aa27.7■■■□□ 2.03
PABPN1-201ENST00000216727 COLQQ9Y215 455 aaPredicted RBP27.7■■■□□ 2.03
PABPN1-201ENST00000216727 HEMK1Q9Y5R4 338 aaPredicted RBP27.7■■■□□ 2.03
PABPN1-201ENST00000216727 CYP7B1O75881 506 aa27.7■■■□□ 2.02
PABPN1-201ENST00000216727 TP53P04637 393 aaPredicted RBP27.7■■■□□ 2.02
PABPN1-201ENST00000216727 THBS1P07996 1170 aa27.7■■■□□ 2.02
PABPN1-201ENST00000216727 IFNA8P32881 189 aa27.7■■■□□ 2.02
PABPN1-201ENST00000216727 GABRA4P48169 554 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms