RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CBX7O95931 251 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HNRNPCL4P0DMR1 293 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ACP2P11117 423 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RRM2P31350 389 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DNAJA1P31689 397 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 MAPK10P53779 464 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 MAP4K2Q12851 820 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 EXOSC6Q5RKV6 272 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HIPK1Q86Z02 1210 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RDH12Q96NR8 316 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RBM4BQ9BQ04 359 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RBM4Q9BWF3 364 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 LIN28AQ9H9Z2 209 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 EXD2Q9NVH0 621 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 FAM118AQ9NWS6 357 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ETAA1Q9NY74 926 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 IFT80Q9P2H3 777 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 AGRPO00253 132 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DSCR3O14972 297 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 AGR2O95994 175 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 S1PR1P21453 382 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PIGAP37287 484 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 KCNC4Q03721 635 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DSG2Q14126 1118 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZBED5Q49AG3 693 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 MLIPQ5VWP3 458 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HMGN2P46Q86SG4 172 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 RIT1Q92963 219 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZNF354BQ96LW1 612 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CCDC74BQ96LY2 380 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 QRSL1Q9H0R6 528 aaKnown RBP18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CDC14AQ9UNH5 594 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PCDHGA5Q9Y5G8 931 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 R4GN57 208 aa18.35■□□□□ 0.53
TNFRSF1A-201ENST00000162749 A0A1B0GX78 115 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 LNP1A1A4G5 178 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ANKRD33BA6NCL7 494 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 A8MVJ9 347 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 KHNYNO15037 678 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 TRMUO75648 421 aaKnown RBP18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZIC2O95409 532 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 IFNW1P05000 195 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ITGA2P17301 1181 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 FPR1P21462 350 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CHRNEQ04844 493 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PMS2P3Q13401 168 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 YOD1Q5VVQ6 348 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GPR141Q7Z602 305 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CDRT4Q8N9R6 151 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PROX1Q92786 737 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 OR1F2PQ96R84 312 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZNF347Q96SE7 839 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DPYSL5Q9BPU6 564 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PIGUQ9H490 435 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 J3KTA2 159 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ADAMDEC1O15204 470 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 FCMRO60667 390 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 MAP3K8P41279 467 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 STT3AP46977 705 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HLCSP50747 726 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DUSP3P51452 185 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ARHGDIAP52565 204 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PDX1P52945 283 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ACY1Q03154 408 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DUSP8Q13202 625 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 MED25Q71SY5 747 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 COMTD1Q86VU5 262 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZG16BQ96DA0 208 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DGAT2Q96PD7 388 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 OR6C1Q96RD1 312 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 WFDC6Q9BQY6 131 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 SPATA5L1Q9BVQ7 753 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 YIPF2Q9BWQ6 316 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GABARAPL1Q9H0R8 117 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZNF304Q9HCX3 659 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 NECTIN3Q9NQS3 549 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 CALML5Q9NZT1 146 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 TESMINQ9Y4I5 508 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 LYVE1Q9Y5Y7 322 aa18.34■□□□□ 0.53
TNFRSF1A-201ENST00000162749 COL5A1P20908 1838 aaPredicted RBP18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 HRKO00198 91 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DNAJB5O75953 348 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZNF883P0CG24 379 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 POLR2IP36954 125 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PLA2G2CQ5R387 149 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ZCCHC12Q6PEW1 402 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 OR52R1Q8NGF1 315 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 NRBF2Q96F24 287 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 GFM1Q96RP9 751 aaKnown RBP18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 EPYCQ99645 322 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 DUSP22Q9NRW4 184 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 PCDHGB3Q9Y5G1 929 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ENPP4Q9Y6X5 453 aa18.33■□□□□ 0.53
TNFRSF1A-201ENST00000162749 ESRRGP62508 458 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 KCNAB2Q13303 367 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ARHGAP11BQ3KRB8 267 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C1orf189Q5VU69 101 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TTC23Q5W5X9 447 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FRRS1Q6ZNA5 592 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 THAP5Q7Z6K1 395 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms