RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Slfn5Q8CBA2 884 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Cldn34b2Q9D9N2 209 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Rhox2bA2A447 191 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Obp1bA2AEP0 171 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Rhox2cA2AWL9 191 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm14743A2BHD2 171 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Skint10A7TZG1 354 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Pdlim1O70400 327 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Scrg1O88745 98 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 PthlhP22858 175 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Fabp7P51880 132 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Cry1P97784 606 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Casp7P97864 303 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Ankrd28Q505D1 1053 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 WdcpQ6NV72 663 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr1106Q7TR57 312 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Clba1Q8BHN9 321 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Commd1Q8K4M5 188 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 SgtbQ8VD33 304 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr1099Q8VG37 312 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Vmn1r71Q8VIC0 307 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Prmt1Q9JIF0 371 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 C1galt1Q9JJ06 363 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Vamp5Q9Z2P8 102 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Trmt1lA2RSY6 728 aaKnown RBP13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Fli1P26323 452 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Resp18P47939 175 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Atxn1P54254 791 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Scgb1a1Q06318 96 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 ClpbQ60649 677 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 MafkQ61827 156 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 AktipQ64362 292 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Ranbp3lQ6PDH4 491 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Nmral1Q8K2T1 309 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 NaaaQ9D7V9 362 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Cpxm1Q9Z100 722 aa13.98□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Glb1l3A2RSQ1 649 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Bloc1s1O55102 125 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Agtr1bP29755 359 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Mbl2P41317 244 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Slain1Q68FF7 579 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Ctdsp2Q8BX07 270 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 MmaaQ8C7H1 415 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 SbsnQ8CIT9 700 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 FbrsQ8R089 466 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr352Q8VGJ9 315 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Rpl14Q9CR57 217 aaKnown RBP13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Zfp534A2A7A1 661 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gpr155A2AWR3 868 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm12789B1AUV7 164 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm6133B2RY53 190 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr376E9Q4M1 320 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 PnmtP40935 295 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 SgcgP82348 291 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Alg11Q3TZM9 492 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr1219Q7TR04 311 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr48Q8VGN4 301 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Hrh4Q91ZY2 391 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Mthfd2lD3YZG8 338 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm45692D3Z0A0 150 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Vmn2r22E9Q7S8 853 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Kcnj5P48545 419 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Pdlim7Q3TJD7 457 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm527Q4KL13 310 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Cfhr2Q4LDF6 332 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 CrhbpQ60571 322 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Acvr1bQ61271 505 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr1051Q7TR76 308 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 4921517D22RikQ8CET0 269 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Oard1Q8R5F3 152 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr1094Q8VF13 330 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr836Q8VFJ3 317 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gmpr2Q99L27 348 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Steap1Q9CWR7 339 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Bcl9Q9D219 1425 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm7697A0A0J9YUH2 350 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm9495A0A0J9YUZ3 350 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Hacd4A2AKM2 232 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 4930595M18RikA2RRY9 829 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 D7Ertd443eD2J0Y4 644 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr287E9PZS7 322 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Zfp616J3QN14 987 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Vmn2r88L7N1W8 857 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Rps2P25444 293 aaKnown RBP13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Cpt1aP97742 773 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Cnn2Q08093 305 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 UnklQ5FWH2 727 aaKnown RBP13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Sox19Q62249 55 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Klhl9Q6ZPT1 617 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Zfp429Q7M6Y0 485 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Pggt1bQ8BUY9 377 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Peli3Q8BXR6 445 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Tmem268Q8R239 342 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Plekhh3Q8VCE9 796 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Med9Q8VCS6 142 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Dhrs4Q99LB2 279 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Snx20Q9D2Y5 313 aa13.97□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Btnl4A2CG29 586 aa13.96□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Olfr727A2RTN7 324 aa13.96□□□□□ -0.17
Pcdha1-201ENSMUST00000070797 Gm572B1ARY8 399 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms