RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 CDRT4Q8N9R6 151 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 RASSF5Q8WWW0 418 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 PTCHD1Q96NR3 888 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF300Q96RE9 604 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-209ENST00000641074 AMBRA1Q9C0C7 1298 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 RARRES3Q9UL19 164 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 MMACHCQ9Y4U1 282 aa17.01■□□□□ 0.31
PHGDH-209ENST00000641074 FLRT2O43155 660 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 FCMRO60667 390 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ZIC2O95409 532 aaPredicted RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 ALPLP05186 524 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ALOX5P09917 674 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 PRKACGP22612 351 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ACP1P24666 158 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 MAP3K8P41279 467 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 YAP1P46937 504 aaKnown RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 PDX1P52945 283 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SERTAD2Q14140 314 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ARHGAP11BQ3KRB8 267 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 VWA2Q5GFL6 755 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 MLIPQ5VWP3 458 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 B3GNT8Q7Z7M8 397 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 HIPK1Q86Z02 1210 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SLC38A9Q8NBW4 561 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 PROX1Q92786 737 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 BARD1Q99728 777 aaKnown RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 SPATA5L1Q9BVQ7 753 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SLC7A5P2Q9GIP4 190 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 QRSL1Q9H0R6 528 aaKnown RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 REEP1Q9H902 201 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SMURF2Q9HAU4 748 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SMPD3Q9NY59 655 aaPredicted RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 CALML5Q9NZT1 146 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SAMHD1Q9Y3Z3 626 aaKnown RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 DSPPQ9NZW4 1301 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 COQ9O75208 318 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 IFNA16P05015 189 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ITGA2P17301 1181 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SSTR4P31391 388 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 DNAJA1P31689 397 aaKnown RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 PPP2R2BQ00005 443 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 KCNC4Q03721 635 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF267Q14586 743 aaPredicted RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 LAPTM4AQ15012 233 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SF3A2Q15428 464 aaKnown RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 MINDY4Q4G0A6 757 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 SWT1Q5T5J6 900 aaKnown RBP17■□□□□ 0.31
PHGDH-209ENST00000641074 MFSD4BQ5TF39 518 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ANKRD34AQ69YU3 496 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 PWWP2BQ6NUJ5 590 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 COMTD1Q86VU5 262 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ZG16BQ96DA0 208 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF354BQ96LW1 612 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF347Q96SE7 839 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 STACQ99469 402 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 OSBPL10Q9BXB5 764 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 DUSP22Q9NRW4 184 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 OCIAD1Q9NX40 245 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 FTSJ1Q9UET6 329 aa17■□□□□ 0.31
PHGDH-209ENST00000641074 CCDC88CQ9P219 2028 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 ASCC3Q8N3C0 2202 aaKnown RBP16.99■□□□□ 0.31
PHGDH-209ENST00000641074 FER1L5A0AVI2 2057 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 J3KTA2 159 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 CDX4O14627 284 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-209ENST00000641074 SCRG1O75711 98 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 HPRP00739 348 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 IFNW1P05000 195 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 GP1BAP07359 652 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 FPR1P21462 350 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 RRM2P31350 389 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 EMDP50402 254 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 EFNA3P52797 238 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 ZFP36L1Q07352 338 aaKnown RBP16.99■□□□□ 0.31
PHGDH-209ENST00000641074 BIKQ13323 160 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 PDK3Q15120 406 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 QSOX2Q6ZRP7 698 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 MARVELD2Q8N4S9 558 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 PIK3R3Q92569 461 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 TFAP2CQ92754 450 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 HOXB13Q92826 284 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-209ENST00000641074 TSLPQ969D9 159 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 CNBD2Q96M20 576 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 SDF2Q99470 211 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 PELOQ9BRX2 385 aaKnown RBP16.99■□□□□ 0.31
PHGDH-209ENST00000641074 SLC22A11Q9NSA0 550 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 IFT80Q9P2H3 777 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-209ENST00000641074 TESMINQ9Y4I5 508 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 ENPP4Q9Y6X5 453 aa16.99■□□□□ 0.31
PHGDH-209ENST00000641074 IGKV3D-11A0A0A0MRZ8 115 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 SNAP29O95721 258 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 GALNSP34059 522 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 PGDP52209 483 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 HPCAP84074 193 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 RHAGQ02094 409 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 MERTKQ12866 999 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF155Q12901 538 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-209ENST00000641074 GK3PQ14409 553 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 CCNJQ5T5M9 372 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 FRRS1Q6ZNA5 592 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 COX15Q7KZN9 410 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms