RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 DGCR2P98153 550 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 TRIM71Q2Q1W2 868 aaKnown RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 PGBD2Q6P3X8 592 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 FAM198BQ6UWH4 519 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 APCDD1Q8J025 514 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 HORMAD2Q8N7B1 307 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 OR13C5Q8NGS8 318 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SPRYD4Q8WW59 207 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 PPCDCQ96CD2 204 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ELMOD3Q96FG2 381 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 NARS2Q96I59 477 aaKnown RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 OR10A4Q9H209 315 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 MAGEH1Q9H213 219 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SERHL2Q9H4I8 314 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 TRPC4Q9UBN4 977 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 RUVBL1Q9Y265 456 aaKnown RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 Q9Y3F1 56 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 PCDHGA9Q9Y5G4 932 aaKnown RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ANKRD36A6QL64 1941 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 UCHL1P09936 223 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ANKRD34CP0C6C1 535 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 CPEP16870 476 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 MMP11P24347 488 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ATP12AP54707 1039 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SLC3A1Q07837 685 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 CNTN1Q12860 1018 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ARL9Q6T311 187 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 RPTNQ6XPR3 784 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 LIX1LQ8IVB5 337 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SIAH3Q8IW03 269 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SERPINA12Q8IW75 414 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 FAM181AQ8N9Y4 354 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 TMEM163Q8TC26 289 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 WNT2BQ93097 391 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 TMEM19Q96HH6 336 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SFXN2Q96NB2 322 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SORCS2Q96PQ0 1159 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SECISBP2Q96T21 854 aaKnown RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 TMEM175Q9BSA9 504 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SRRDQ9UH36 339 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 STOML2Q9UJZ1 356 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 HRH3Q9Y5N1 445 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 PTPRDP23468 1912 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 QSOX1O00391 747 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ADAMTS4O75173 837 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 TCRBP04435 133 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 H1F0P07305 194 aaKnown RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SLC6A1P30531 599 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ACVR1BP36896 505 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 CSKP41240 450 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF770Q6IQ21 691 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ZER1Q7Z7L7 766 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 NXPE1Q8N323 547 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 OR4D9Q8NGE8 314 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 OR52H1Q8NGJ2 320 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 OR51G2Q8NGK0 314 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 MOSPD2Q8NHP6 518 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 LINC01599Q8WXQ3 324 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 SEC22CQ9BRL7 303 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ASIC5Q9NY37 505 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 FBXW2Q9UKT8 454 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 COPS3Q9UNS2 423 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 NTNG1Q9Y2I2 539 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 PCDHGB7Q9Y5F8 929 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 CACNG2Q9Y698 323 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 CLDN11O75508 207 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SLC16A8O95907 504 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SOD1P00441 154 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
SCARB2-227ENST00000640957 LIMS3P0CW19 117 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 LIMS4P0CW20 117 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 RRASP10301 218 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 GIPRP48546 466 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SP3Q02447 781 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SYPL1Q16563 259 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SLC25A35Q3KQZ1 300 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 NCEH1Q6PIU2 408 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 OR7G3Q8NG95 312 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SLC38A5Q8WUX1 472 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 NXPE2Q96DL1 559 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SGTBQ96EQ0 304 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SCRN2Q96FV2 425 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 OR4K3Q96R72 315 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SLC22A12Q96S37 553 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 GSX2Q9BZM3 304 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SF3B6Q9Y3B4 125 aaKnown RBP12.97□□□□□ -0.33
SCARB2-227ENST00000640957 A0A1W2PRB8 838 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 GPR171O14626 319 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 INPPL1O15357 1258 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 LPLP06858 475 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 JUPP14923 745 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 CFL1P23528 166 aaKnown RBP12.97□□□□□ -0.33
SCARB2-227ENST00000640957 BUD31P41223 144 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-227ENST00000640957 SLC6A11P48066 632 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 CDH4P55283 916 aa12.97□□□□□ -0.33
SCARB2-227ENST00000640957 MAZP56270 477 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms